Gene Jden_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1801 
Symbol 
ID8380965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1967892 
End bp1968911 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content64% 
IMG OID645004555 
ProductCBS domain containing protein 
Protein accessionYP_003161747 
Protein GI256833020 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.205512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGGC AACCGGCCAC CACGCCACGC CCCTCCACAC CACCCACAGT GCGACGAGAC 
CTCGTCATGA CCGCAGGAAC CTTCATCGTG GGGTACCTTG CCTACGCTTT CCTCCACACC
CCACTGAGCA CTACTCTCAC CGACTCCACC CTCAGCGCTG CGTCCGCTCA CCTCGTCGCG
GCTGTACTCA TTGCCTGCGC CGTGCTCCTC ATCAGTGCGC TCACCGCTGC CATCGTCCTG
CGCGGCACCC CACAGGTGAA GTCCTCACCA CCTGCCAACG ACCTGGCTGA CGACCTCATT
ACCGACCTCA TCGCCGGTGC CGCCGACCTC GACGAACTCC GCGCCGGCGA CGTCATGACC
GACCGAACCC GACTCATCAC TCTGCCCCCT GACGCAACAG CAACCGACGT CATCACCCGC
GCCCACCACA CCGGACACTC CCGATTCCCC ATCACCGGCG AATCACGCGA CGATATCCTC
GGCCTCGTCC ACCTACGCCG TGCCATCTCC GTCCCCCCAG ATCGCAGACC CGACGTCCCC
GCCGCCGCGA TCATGGACGA CGCCCCCCGC GTCCCCGAAA CCATGACGCT GCGCCCACTC
ATGAACTTCC TGCGTGAACA AGGACGCCAA ATGGCCATCG TCGAAGACGA ATACGGAGGA
ACCGCAGGGA TCGTCACCCT CGAAGACGTC GTCGAAGAAA TCGTCGGAGA CGTTGCCGAC
GAACACGACC CACGCCGCGC AGGTGTCCTC TACGCCTCGG ACGGAACGTG GTCCGTCCCT
GGACACCTGC GCCCAGACGA ACTCGCCGAA CGCACCGGAC TTCGCCTGCC CACAGACCCC
GACTACGAAA CCCTCGCCGG ACTAGTCATG AAAACCCTCG CTGACATCCC ACAACCAGGA
GCCAGCATCA CAATCGCCCA AGAAGCCACC ACAAACCTGC CCGGCAACGT CACCATCACC
GTGGACACGA CAGACGGCAG GCGCATCGAC AAACTGCGAG TGAAACGCAC GACGACATGA
 
Protein sequence
MTRQPATTPR PSTPPTVRRD LVMTAGTFIV GYLAYAFLHT PLSTTLTDST LSAASAHLVA 
AVLIACAVLL ISALTAAIVL RGTPQVKSSP PANDLADDLI TDLIAGAADL DELRAGDVMT
DRTRLITLPP DATATDVITR AHHTGHSRFP ITGESRDDIL GLVHLRRAIS VPPDRRPDVP
AAAIMDDAPR VPETMTLRPL MNFLREQGRQ MAIVEDEYGG TAGIVTLEDV VEEIVGDVAD
EHDPRRAGVL YASDGTWSVP GHLRPDELAE RTGLRLPTDP DYETLAGLVM KTLADIPQPG
ASITIAQEAT TNLPGNVTIT VDTTDGRRID KLRVKRTTT