| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1790 |
|---|
| Symbol | |
|---|
| ID | 8380954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1952983 |
|---|
| End bp | 1954284 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645004543 |
|---|
| Product | Homoserine dehydrogenase |
|---|
| Protein accession | YP_003161736 |
|---|
| Protein GI | 256833009 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCAGCAC ACACGGAGCA CCAACCCATC CGCATTGCCC TCCTCGGGTG TGGGGTGGTT
GGAACCCAGG TCGCGCGCAT CCTGTTACAC GAACGTCGGT CTCTTGCGCG CCGGGTCGGA
GCTGAACTGA CACTCGTGGG AATCGCGGTC CGTGACACTA CTGTCCCGCG CGATCCCGCC
ATCCCCACCG ACCTCCTCAC CGCCGACGCC ACCCAGCTCG TGGAAAACGC AGATATCGTC
ATCGAAGTGA TGGGCGGTAT TGACCCCGCA CAGTCGCTCA TTGAGCACGC CCTCGCATCA
GGTGCCTCCG TGGTCACCGC TAACAAAGCA CTCCTTGCCC AGCAAGGACC AGCCCTGTAC
GAGCGTGCCT CACACGAAAA CGTTGACCTT GCCTACGAAG CTGCAGTCGC CGGAGCCATC
CCCATCATCC GCCCCATCCG GGAATCATTA GCAGGGGACA ACATCACCCG AGTACTGGGC
ATCGTCAACG GAACAACCAA CTATGTCCTT GACCAAATGA CCCGCCACGG GCTCACCCTC
GACACCGCAG TCGCCGATGC ACAACGCCTG GGATACGCCG AAGCCGACCC CACCGCCGAC
GTCGAAGGAC ACGACGCAGC CGCCAAAGCT GCGATCCTCG CCTCACTGGC CTTCCACACC
CGCGTCCACC TCGACGACGT TGCCTGCGAA GGGATCACCA AAGTCACCGC AGAGGACGTT
GCTTGGGCTA CCCGCAGCGG GCATGTCATC AAACTCCTTG CCATCTGCGA ACGCACCACC
CACGGAGTCT CCGCCCGTGT CCACCCCGCG CTCGTGCCCA CCACACATCC CCTCGCTTCC
GTGTCAGATG CGTTTAACGC TGTGTTCGTC GAAGCAGAGA ACGCCGGCCC ACTCATGTTC
TACGGGCAAG GCGCAGGTGG GGCTCCCACC GCATCAGCAG TCATGGGTGA CGTCGTCACA
GCTGCCCGCA ACCGGGTCCT TGGTGCTCGC GGAGCAGGAG AATCTGTGGC AGCAGACTTG
CCCATTTCCG CACCAGGTGA CGCCCTCACC CGGTACCAAA TCCGTTTGAG CGTGCTAGAC
CAGCAAGGTG TCCTTGCCAG CATCGCCAAA GAGTTTGCGG CCCGGGACGT GTCCATCGAA
GCGGTCACCC AAGATCTCCG CCATGACAAA GATGGATATG CTGTCCTCGT CATTGCAACC
CACACATCTC GAGAAGCTGA CCTGGCTGAC ACCGTGTCAG CGCTGACATC ACTCGACGTG
GTCGATGAAG TCATGTCCGT CCTACGAATT GAAGGTTCCT GA
|
|---|
| Protein sequence | MPAHTEHQPI RIALLGCGVV GTQVARILLH ERRSLARRVG AELTLVGIAV RDTTVPRDPA
IPTDLLTADA TQLVENADIV IEVMGGIDPA QSLIEHALAS GASVVTANKA LLAQQGPALY
ERASHENVDL AYEAAVAGAI PIIRPIRESL AGDNITRVLG IVNGTTNYVL DQMTRHGLTL
DTAVADAQRL GYAEADPTAD VEGHDAAAKA AILASLAFHT RVHLDDVACE GITKVTAEDV
AWATRSGHVI KLLAICERTT HGVSARVHPA LVPTTHPLAS VSDAFNAVFV EAENAGPLMF
YGQGAGGAPT ASAVMGDVVT AARNRVLGAR GAGESVAADL PISAPGDALT RYQIRLSVLD
QQGVLASIAK EFAARDVSIE AVTQDLRHDK DGYAVLVIAT HTSREADLAD TVSALTSLDV
VDEVMSVLRI EGS
|
|---|
| |