Gene Jden_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1789 
Symbol 
ID8380953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1951913 
End bp1952983 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content59% 
IMG OID645004542 
Productthreonine synthase 
Protein accessionYP_003161735 
Protein GI256833008 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCACG TGTGGCAAGG CATCATCAAA GAATATGCCG ACTACCTGCC AGAACACCTC 
ACCACCCACA TTGTGACACT CGGTGAAGGG GGCACCCCAC TCGTTCCGGC CCCAGCACTG
TCCCAGGCAA CCGGTGCAAC GGTCTACCTC AAAGTTGAAG GCATGAACCC CACCGGTTCC
TTCAAAGACC GGGGCATGAC CACCGCAATT TCGGCTGCTG CTGCTCGGGG AGCCAAAGCA
GTAGTGTGCG CATCGACCGG TAACACCTCC GCGTCCGCCG CCGCCTACGC CACTCACGCT
GGAATGGTCT GTGCTGTCCT GGTCCCGGAT GGGAAGATTG CCATGGGGAA GCTCTCACAA
GCCATTGCCC ACGGTGCACA ACTCCTCCAA GTCGACGGAA ACTTTGACGA TTGCCTTGTC
GCGGCCCGGA AACTTGCTGA AGCCTACCCG GTTGAGCTCG TGAACTCGGT CAACCCTGAC
CGTATTGAAG GACAAAAAAC CGGGTCATTT GAGGTTGTTG ACGTCCTTGG TGACGCCCCC
GATATTCACG CTCTGCCGGT AGGAAACGCA GGGAACATCA CTGCGTACTG GAAGGGGTAC
CAGGAATACT ACGACGCTGG TCAGGCCACA AAAACCCCCG CCATGTGGGG TTTTCAAGCC
GAAGGTGCAT CCCCGATCGT TGCTGGACAC CCGTTTGACG AACCAGAAAC TATTGCCACC
GCTATCCGCA TTGGGAACCC CGCGTCCTGG GACAAAGCTC TGGCAGCACG AGACACCTCA
GGCGGTCTCA TTGACTCCGT CACAGACCAC GAAATCCTTG CCGCTCACCG GTTGCTGTCC
GCCGATGTTG GCGTGTTTGT TGAGCCAGCC TCGGCCGCTG GAGCTGCGGG GATCCTCAAG
CACGCTGCCG CTGGCCGCGT GCCCCACGGA GCCACCATTG TTATTACCGT CACCGGCCAT
GGTTTGAAAG ATCCGGCGTG GGCGCTTCGC ACAGAATCTG GCGAGGACAT CACTCCCGTG
CGAGTCACCG CTGATGTGGT GTCCATTGCG CAGGCTCTGG GACTGAACTG A
 
Protein sequence
MAHVWQGIIK EYADYLPEHL TTHIVTLGEG GTPLVPAPAL SQATGATVYL KVEGMNPTGS 
FKDRGMTTAI SAAAARGAKA VVCASTGNTS ASAAAYATHA GMVCAVLVPD GKIAMGKLSQ
AIAHGAQLLQ VDGNFDDCLV AARKLAEAYP VELVNSVNPD RIEGQKTGSF EVVDVLGDAP
DIHALPVGNA GNITAYWKGY QEYYDAGQAT KTPAMWGFQA EGASPIVAGH PFDEPETIAT
AIRIGNPASW DKALAARDTS GGLIDSVTDH EILAAHRLLS ADVGVFVEPA SAAGAAGILK
HAAAGRVPHG ATIVITVTGH GLKDPAWALR TESGEDITPV RVTADVVSIA QALGLN