Gene Jden_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1771 
Symbol 
ID8380935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1935086 
End bp1935781 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content54% 
IMG OID645004524 
Producthypothetical protein 
Protein accessionYP_003161717 
Protein GI256832990 
COG category[L] Replication, recombination and repair 
COG ID[COG1637] Predicted nuclease of the RecB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.778992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTTTAG TTGTCGCAGA GTGCCAAGCC CATTACAGCG GGCGGTTGGC CGCACATTTA 
CCGCGAGCGC GTCGTCTCAT TGTGGTGAAG GCCGATGGTT CGGTGTTGCT CCATTCTGAT
GGGGGCTCGT ACAAACCTCT CAACTGGATG AGCCCTCCAT GTTCGATGGC CGTTCGTGAG
CCTGACGATC TCCAAAAGGA ACGTGGAGTG ACTGAGGTGT GGCGAGTCCA GCACTCAAAA
GCAGACGATC GTCTCGATAT TGAAATTTTT GATGTTCACC ACGATTCTGC ACATGAATTA
GGTGTGGACC CAGGGTTAGT GAAGGACGGC GTAGAAGCCC ATCTGCAACG GATGCTTGCT
GAGCAAATTG ACCTGGTTGG TCCAGGACAT ACCCTCATTC GCCGGGAATA CCCCACGGCC
ATTGGGCCGG TCGATATTCT TGCCCGCGAT GCACACGGCG CAACAGTCGC CATCGAAATT
AAACGCCGCG GTGACATTGA TGGGGTCGAA CAGTTAACCA GATACGTGGA ACTGTTGAAC
CGCGACCCAT TACTCACACC GGTCCGCGGT GTGTTTGCGG CCCAGGAAAT CAAACCGCAA
GCCAGGGTTC TTGCCATTGA TCGCGGTTTC ACCTGCCTCA CTCTCAACTA TGAGGAAATG
AAAGGCTACG ACGACGTGGA TTCTCGGCTT TTCTGA
 
Protein sequence
MRLVVAECQA HYSGRLAAHL PRARRLIVVK ADGSVLLHSD GGSYKPLNWM SPPCSMAVRE 
PDDLQKERGV TEVWRVQHSK ADDRLDIEIF DVHHDSAHEL GVDPGLVKDG VEAHLQRMLA
EQIDLVGPGH TLIRREYPTA IGPVDILARD AHGATVAIEI KRRGDIDGVE QLTRYVELLN
RDPLLTPVRG VFAAQEIKPQ ARVLAIDRGF TCLTLNYEEM KGYDDVDSRL F