Gene Jden_1764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1764 
Symbol 
ID8380928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1922152 
End bp1924212 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content62% 
IMG OID645004517 
ProductBeta-galactosidase 
Protein accessionYP_003161710 
Protein GI256832983 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1874] Beta-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00394177 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0245324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCGAT CGGGACGGCC ACCCCTGGGC CACCGCATCG CCTACGGCGG AGACTACAGT 
CCAGAACAGT GGGACCCAGA CACCTGGCGT GACGATATCG CCCTCATGCG CACCGCTGGC
GTCACGCTTA TTACCCTCGG TGTGTTCAGC TGGGCAGACC TCGAACCACA CCCCGGGACC
TACACGTTTG ACTGGCTCGA TGACGTCATC AACGCCCTCC ACGACGCGGG GATCGCCGTT
GACCTCGCAA CCCCCACCGC ATCCCCGCCC CCATGGATGG GGCACCTCCA CCCGGACACG
CTTGCCCGAG ACCGTGACGG CCACACCATG CACTGGGGGT CGCGCAACCA CTTTTCCCCC
GCATCAGCCA CCTACCGTGA CTACTGTGCG CGCATCGTCA CCCAGCTGGT TACCCGGTAC
GTCCACCACC CGGCTGTGGT GATGTGGCAC ATCGGGAATG AATACGGGCA ACTGTGCTAC
TCCGATGAAG CCGCCACCCG TTTTCGCAAC TGGCTCCTTG AGCGCTACCA CAGCATCGAC
GCGCTCAACG ACGCGTGGGG AACCTCCTTT TGGTCCCAAC GCTACGGTTC CTTCGACGAA
GTCATCCCTC CCCGGAGCGC CCCCTACCTC ATCAACCCCG GACTCAATCT TGACTACCAA
CGGTTCAGTT CCGACCTCAT GCGCGACTGC CTGCGCGAAC AACGCGACAT CATTCGAGCC
GCTGACCCAC ACGCCGTCAT CACCACAAAC TTCATGGGTT TCTTCCCCCT GGTTAATTAC
CCCACCTGGG TCAATGACCT CGACATCATC AGTGATGACA TCTACCCCGA CCCCACCAAC
GAGCGTTCCT ACCACGACAC CGCTCTCGCC CACACCCTCA TGCGATCCCT GGCCAACGGC
AAACCATGGA TGCTCATGGA ACAAGCCGTC TCTGCAGTGA ACTGGCGTCC CCACAACGTC
CCCAAACCCG TCCACCAAAC CCGCCGCGAG GCGCTCACAG CGGTCGCTCG GGGTGCGCGT
GGGATCTGCT ACTTTCAGTG GCGCGCATCG GCGGTTGGGT CAGAACGATT CCACTCTGCG
ATGTTGCCGC ATCAAGGGCC CAACACCCCT CACTTTGAGT CGGTGTGCGC ACTGGGTCGT
GAACTAGAAC ACCTGTCCAC GGTGCTCCCC CACGATGACA ACCTGTTACC GCATGTTCGG
GTAGCTCTCG TTTTCACCTG GGAGAACTGG TGGGCCACCC GTGAACCGGC GCTCCCCACG
CACCAGTTAG ATGCCTATGC GGTTCTCCGT CGCTGGTTTA CCGCACTGCA CGACCTGGGG
GTCACCGTTG ACATTGTGCC GCCCGGACCG CATCTCACCC AGTATGACGT CGTTGCAGTG
CCCAACCTTT ACCAAGCCAA CGACAGTGAT GTGGAGGCGT TGCGTGCTGT GAGCGAAGCG
GGCCACACCT TGATTCTTGG ACCATTTTCG GGCATCGCTC ATGGAGACGG GCACATCCAT
GCGGGGTACT TCCCGGTACC GCTGGCGGAC CTCACCGGAA CTCACGGACA ACAATGGGTG
CCCCTTGGGC ACGCCACGCA GTTCACCCTC GGTGTGGACA GCCTGCCGGT GCCCAGGTAC
GCCGATCACA TCACCCTGGC CAGTGCCACA GCCACGGCTG TGGCATCCTT TCCTGCCGAT
GCGCCCCACG GGTTGGCGAA CGCCCCTGCG GTGGTCCACA ACCCAGCAAC CGATGTGTGG
ACCCTTGCCG CAGATCTTGA CAGCCCAGCG CTGAAAGCAC TGTTCACCAG GATTCTGCCA
CCTGACCTCA TGCCTGGGCG TGACCTGCCA GACGGCGTTG AGGTGATATC CGGTGCACTG
CACACTCTCA TCGTGAACCA CACGGACACC GCACACACAG TCGCGCTGGC AAGTCTGGCC
GGGCACAACC GACGTCACCC CTGGGTGGGG CAGTGGCACG ACGCCTTGAC GATGACCAGC
TATGACGGGT CCAATACCGT CCACGTGCCC GCCTACGATG CCGTGTTTCT CGTTGCGGCC
AACGCCCTTG ACAGAATCTA A
 
Protein sequence
MHRSGRPPLG HRIAYGGDYS PEQWDPDTWR DDIALMRTAG VTLITLGVFS WADLEPHPGT 
YTFDWLDDVI NALHDAGIAV DLATPTASPP PWMGHLHPDT LARDRDGHTM HWGSRNHFSP
ASATYRDYCA RIVTQLVTRY VHHPAVVMWH IGNEYGQLCY SDEAATRFRN WLLERYHSID
ALNDAWGTSF WSQRYGSFDE VIPPRSAPYL INPGLNLDYQ RFSSDLMRDC LREQRDIIRA
ADPHAVITTN FMGFFPLVNY PTWVNDLDII SDDIYPDPTN ERSYHDTALA HTLMRSLANG
KPWMLMEQAV SAVNWRPHNV PKPVHQTRRE ALTAVARGAR GICYFQWRAS AVGSERFHSA
MLPHQGPNTP HFESVCALGR ELEHLSTVLP HDDNLLPHVR VALVFTWENW WATREPALPT
HQLDAYAVLR RWFTALHDLG VTVDIVPPGP HLTQYDVVAV PNLYQANDSD VEALRAVSEA
GHTLILGPFS GIAHGDGHIH AGYFPVPLAD LTGTHGQQWV PLGHATQFTL GVDSLPVPRY
ADHITLASAT ATAVASFPAD APHGLANAPA VVHNPATDVW TLAADLDSPA LKALFTRILP
PDLMPGRDLP DGVEVISGAL HTLIVNHTDT AHTVALASLA GHNRRHPWVG QWHDALTMTS
YDGSNTVHVP AYDAVFLVAA NALDRI