Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1764 |
Symbol | |
ID | 8380928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1922152 |
End bp | 1924212 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645004517 |
Product | Beta-galactosidase |
Protein accession | YP_003161710 |
Protein GI | 256832983 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1874] Beta-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00394177 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0245324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACCGAT CGGGACGGCC ACCCCTGGGC CACCGCATCG CCTACGGCGG AGACTACAGT CCAGAACAGT GGGACCCAGA CACCTGGCGT GACGATATCG CCCTCATGCG CACCGCTGGC GTCACGCTTA TTACCCTCGG TGTGTTCAGC TGGGCAGACC TCGAACCACA CCCCGGGACC TACACGTTTG ACTGGCTCGA TGACGTCATC AACGCCCTCC ACGACGCGGG GATCGCCGTT GACCTCGCAA CCCCCACCGC ATCCCCGCCC CCATGGATGG GGCACCTCCA CCCGGACACG CTTGCCCGAG ACCGTGACGG CCACACCATG CACTGGGGGT CGCGCAACCA CTTTTCCCCC GCATCAGCCA CCTACCGTGA CTACTGTGCG CGCATCGTCA CCCAGCTGGT TACCCGGTAC GTCCACCACC CGGCTGTGGT GATGTGGCAC ATCGGGAATG AATACGGGCA ACTGTGCTAC TCCGATGAAG CCGCCACCCG TTTTCGCAAC TGGCTCCTTG AGCGCTACCA CAGCATCGAC GCGCTCAACG ACGCGTGGGG AACCTCCTTT TGGTCCCAAC GCTACGGTTC CTTCGACGAA GTCATCCCTC CCCGGAGCGC CCCCTACCTC ATCAACCCCG GACTCAATCT TGACTACCAA CGGTTCAGTT CCGACCTCAT GCGCGACTGC CTGCGCGAAC AACGCGACAT CATTCGAGCC GCTGACCCAC ACGCCGTCAT CACCACAAAC TTCATGGGTT TCTTCCCCCT GGTTAATTAC CCCACCTGGG TCAATGACCT CGACATCATC AGTGATGACA TCTACCCCGA CCCCACCAAC GAGCGTTCCT ACCACGACAC CGCTCTCGCC CACACCCTCA TGCGATCCCT GGCCAACGGC AAACCATGGA TGCTCATGGA ACAAGCCGTC TCTGCAGTGA ACTGGCGTCC CCACAACGTC CCCAAACCCG TCCACCAAAC CCGCCGCGAG GCGCTCACAG CGGTCGCTCG GGGTGCGCGT GGGATCTGCT ACTTTCAGTG GCGCGCATCG GCGGTTGGGT CAGAACGATT CCACTCTGCG ATGTTGCCGC ATCAAGGGCC CAACACCCCT CACTTTGAGT CGGTGTGCGC ACTGGGTCGT GAACTAGAAC ACCTGTCCAC GGTGCTCCCC CACGATGACA ACCTGTTACC GCATGTTCGG GTAGCTCTCG TTTTCACCTG GGAGAACTGG TGGGCCACCC GTGAACCGGC GCTCCCCACG CACCAGTTAG ATGCCTATGC GGTTCTCCGT CGCTGGTTTA CCGCACTGCA CGACCTGGGG GTCACCGTTG ACATTGTGCC GCCCGGACCG CATCTCACCC AGTATGACGT CGTTGCAGTG CCCAACCTTT ACCAAGCCAA CGACAGTGAT GTGGAGGCGT TGCGTGCTGT GAGCGAAGCG GGCCACACCT TGATTCTTGG ACCATTTTCG GGCATCGCTC ATGGAGACGG GCACATCCAT GCGGGGTACT TCCCGGTACC GCTGGCGGAC CTCACCGGAA CTCACGGACA ACAATGGGTG CCCCTTGGGC ACGCCACGCA GTTCACCCTC GGTGTGGACA GCCTGCCGGT GCCCAGGTAC GCCGATCACA TCACCCTGGC CAGTGCCACA GCCACGGCTG TGGCATCCTT TCCTGCCGAT GCGCCCCACG GGTTGGCGAA CGCCCCTGCG GTGGTCCACA ACCCAGCAAC CGATGTGTGG ACCCTTGCCG CAGATCTTGA CAGCCCAGCG CTGAAAGCAC TGTTCACCAG GATTCTGCCA CCTGACCTCA TGCCTGGGCG TGACCTGCCA GACGGCGTTG AGGTGATATC CGGTGCACTG CACACTCTCA TCGTGAACCA CACGGACACC GCACACACAG TCGCGCTGGC AAGTCTGGCC GGGCACAACC GACGTCACCC CTGGGTGGGG CAGTGGCACG ACGCCTTGAC GATGACCAGC TATGACGGGT CCAATACCGT CCACGTGCCC GCCTACGATG CCGTGTTTCT CGTTGCGGCC AACGCCCTTG ACAGAATCTA A
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Protein sequence | MHRSGRPPLG HRIAYGGDYS PEQWDPDTWR DDIALMRTAG VTLITLGVFS WADLEPHPGT YTFDWLDDVI NALHDAGIAV DLATPTASPP PWMGHLHPDT LARDRDGHTM HWGSRNHFSP ASATYRDYCA RIVTQLVTRY VHHPAVVMWH IGNEYGQLCY SDEAATRFRN WLLERYHSID ALNDAWGTSF WSQRYGSFDE VIPPRSAPYL INPGLNLDYQ RFSSDLMRDC LREQRDIIRA ADPHAVITTN FMGFFPLVNY PTWVNDLDII SDDIYPDPTN ERSYHDTALA HTLMRSLANG KPWMLMEQAV SAVNWRPHNV PKPVHQTRRE ALTAVARGAR GICYFQWRAS AVGSERFHSA MLPHQGPNTP HFESVCALGR ELEHLSTVLP HDDNLLPHVR VALVFTWENW WATREPALPT HQLDAYAVLR RWFTALHDLG VTVDIVPPGP HLTQYDVVAV PNLYQANDSD VEALRAVSEA GHTLILGPFS GIAHGDGHIH AGYFPVPLAD LTGTHGQQWV PLGHATQFTL GVDSLPVPRY ADHITLASAT ATAVASFPAD APHGLANAPA VVHNPATDVW TLAADLDSPA LKALFTRILP PDLMPGRDLP DGVEVISGAL HTLIVNHTDT AHTVALASLA GHNRRHPWVG QWHDALTMTS YDGSNTVHVP AYDAVFLVAA NALDRI
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