| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1752 |
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| Symbol | |
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| ID | 8380916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1904374 |
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| End bp | 1906491 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004505 |
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| Product | ribonucleoside-diphosphate reductase, alpha subunit |
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| Protein accession | YP_003161698 |
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| Protein GI | 256832971 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0635654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACC AACTGGACTA CCACGCGCTC AACGCGATGC TGAACCTCTA CGGACCCAAC
GGAGAGATCC AGTTCGACAA AGACCGTGAA GCGGCCCGGC AGTACTTCCT CCAACACGTC
AACCAAAACA CGGTGTTCTT CCACAGCCTC GAGGAAAAAC TCGACTACCT CGTGGAGAAC
GACTACTACG AAGCCAGCGT CCTGAACACC TACAGCCGTG AGTTCATCAC CCGGCTATTC
GACGCAGCCT ACGCAATGAA ATTCCGGTTT GAAACCTTCC TGGGCGCGTT CAAGTACTAC
ACGTCCTACA CCCTGAAAAC ATTCGACGGA AAACGCTACC TCGAACGCTT CGAAGACCGC
GTCTGCATGG TTGCGCTCAC CCTCGCCGAC GGCGACGAAA CCCTCGCTCT TCAACTCGTT
GACGAGATCA TCTCCGGGCG TTTCCAACCC GCAACCCCCA CCTTCTTAAA CTCCGGGAAA
AAACAACGCG GCGAACCCGT GTCCTGCTTC CTGCTGCGCA TCGAAGACAA CATGGAGTCC
ATCGCCCGAG GCGTCAACTC CGCGCTTCAA CTGTCCAAAC GCGGGGGAGG GGTTGCGCTG
CTGCTGTCCA ACCTCCGCGA ATTTGGTGCC CCCATTAAGA AGATCGAAAA CCAGTCGTCC
GGTGTCATCC CGGTCATGAA ACTCCTGGAA GACTCCTTCT CTTACGCAAA CCAACTCGGT
GCACGTCAAG GGGCCGGTGC TGTGTACCTG CACGCCCACC ACCCCGACAT CATGCGGTTC
CTGGACACCA AACGCGAAAA CGCCGACGAA AAAGTTCGCA TCAAAACCCT GTCCATTGGT
GTGGTCATCC CCGACATCAC CTTTGAGCTC GCGAAAAAGA ACGAGGACAT GTACCTGTTC
TCGCCTTACG ATGTGGAACG CATTTACGGC AAACCGTTTG CTGATGTCAA CGTCTCCGAG
CTGTACCACG AGATGGTCGA CGACGGTCGC ATCCGGAAAA CCAAAATCAA AGCCCGCGAC
TTCTTCCAAA CCATCGCGGA ACTGCAGTTT GAATCTGGTT ACCCGTACGT CATGTTCGAA
GACACCGTGA ACAAATCCAA CCCCATCAAG GGCAAGATCA CGCACTCGAA CCTCTGCTCA
GAAATCCTTC AGGTCTCCAC CCCCTCGACC TACAACGATG ACCTGTCGTA CAAGGAAATC
GGGCGGGACA TTTCCTGCAA CCTCGGCTCA CTGAACATTG CCAAAGCAAT GGACGGGGGA
AACCTGGGGG CCACGGTTGA CACCGCAATC CGCGCACTGA CCGCGGTATC GGATCAAACC
TCCATCGACT CGGTGCCCTC CATCCGGCAC GGCAACGAAC TAGGCCACGC CATTGGTTTA
GGGCAAATGA ACCTCCATGG GTTCCTTGCC CGCGAACACA TCCATTACGG GTCAGAAGAA
GGAATCGACT TCACCTCGAT CTACTTCTAC GCGGTGGCCT ACCACGCCAT CAAAGCCTCC
AACCAACTCG CCATTGAGCG GGGGCGCGCC TTTGGTGGCT TCGAAGACTC CACCTACGCG
TCCGGTGAAT ACTTTGACAA GTACACCAAC CGAGTGTGGG AACCAACAAC CCAACGTGTC
AAAGACCTGT TCGAGAAGTT CGGGATCGCC ATCCCCACCC AAGACGACTG GCGTGAACTG
AAAAAGTCCG TCATGGAACA CGGGATTTAC AACCAGAACC TCCAGGCGGT TCCCCCCACC
GGGTCGATCT CCTACATCAA CAACTCGACG TCCTCAATCC ACCCGATTGT CTCCAAAATT
GAGATCCGCA AGGAAGGCAA AATCGGGCGC GTGTACTACC CAGCGCCGTA CATGACCAAC
GAGAACCTCG AGTACTACCA AGACGCCTAC GAAATCGGCT ACGAAAAGAT CGTCGACACG
TACGCGGCAG CCACCGAGCA CGTTGACCAA GGCCTGTCTT TGACGTTGTT CTTCAAGGAC
ACCGCGACCA CCCGTGACGT GAACCGTGCC CAAATTTACG CGTGGCGCAA GGGCATCAAA
ACTCTGTACT ACATCCGACT CCGCCAACTC GCCCTCACCG GAACAGAGGT CGAAGGCTGC
GTCTCCTGCA TGCTGTAA
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| Protein sequence | MTDQLDYHAL NAMLNLYGPN GEIQFDKDRE AARQYFLQHV NQNTVFFHSL EEKLDYLVEN
DYYEASVLNT YSREFITRLF DAAYAMKFRF ETFLGAFKYY TSYTLKTFDG KRYLERFEDR
VCMVALTLAD GDETLALQLV DEIISGRFQP ATPTFLNSGK KQRGEPVSCF LLRIEDNMES
IARGVNSALQ LSKRGGGVAL LLSNLREFGA PIKKIENQSS GVIPVMKLLE DSFSYANQLG
ARQGAGAVYL HAHHPDIMRF LDTKRENADE KVRIKTLSIG VVIPDITFEL AKKNEDMYLF
SPYDVERIYG KPFADVNVSE LYHEMVDDGR IRKTKIKARD FFQTIAELQF ESGYPYVMFE
DTVNKSNPIK GKITHSNLCS EILQVSTPST YNDDLSYKEI GRDISCNLGS LNIAKAMDGG
NLGATVDTAI RALTAVSDQT SIDSVPSIRH GNELGHAIGL GQMNLHGFLA REHIHYGSEE
GIDFTSIYFY AVAYHAIKAS NQLAIERGRA FGGFEDSTYA SGEYFDKYTN RVWEPTTQRV
KDLFEKFGIA IPTQDDWREL KKSVMEHGIY NQNLQAVPPT GSISYINNST SSIHPIVSKI
EIRKEGKIGR VYYPAPYMTN ENLEYYQDAY EIGYEKIVDT YAAATEHVDQ GLSLTLFFKD
TATTRDVNRA QIYAWRKGIK TLYYIRLRQL ALTGTEVEGC VSCML
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