Gene Jden_1741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1741 
Symbol 
ID8380907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1891838 
End bp1892527 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content62% 
IMG OID645004496 
Productprotein of unknown function DUF125 transmembrane 
Protein accessionYP_003161689 
Protein GI256832962 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCG ACGATTCGTC ACAACATTTG GATGAGCCGC ACCGTGCGGG CCTGGCGCAG 
CGCCTGAACT GGCTTCGCGC AGGTGTCCTT GGGGCAAACG ACGGTATCGT TTCGACGGCG
GGAGCACTCC CGGTCCTGCT GGCTGGATCG GCAGCCTTGG TGGGTGGTGC GATCTCGATG
GCGCTTGGCG AGTACGTCTC TGTGTCAAGC CAGCGCGATA CTGAGCATGC GTTGATCGAG
AAGGAACGCG GAGAGTTAGC CACAGATCCA GACGCTGAGT TCATCGAACT TGTCGGTCTG
TTCGAAGCCC GAGGGTTGAG TCGGGAGACG GCGACGCTCG CGGCATCCGA GCTGACCGAA
AAGGATGCAC CAGCGGCACA CCTGGCCGTC GAGCTGAATA TCGATCAGGA CGACGTCGTC
AGCCCGTGGC ATGCGGCGCT TGCGTCGGCG GTCGCCTTCA TTCTCGGTGC GTTACTGCCA
ATGGCTACGA TCCTCTTCTT GCCGCACCCG GAACGGATCA TCTGGACGTT TGCCGCGACA
ATTTTCGCGT TGGCGATCAC CGGCTATGTT GCGGCATGGA TCGGCGGCGC ACGACGGTGG
CGTGCGGTAC TTCGCACGGT GATCGGTGGC GCTTTGGCGC TCGGCGCGAC CTTCTTGGTT
GGCTCTCTCT TTGGTGCCAC TGTCCTGTAG
 
Protein sequence
MTVDDSSQHL DEPHRAGLAQ RLNWLRAGVL GANDGIVSTA GALPVLLAGS AALVGGAISM 
ALGEYVSVSS QRDTEHALIE KERGELATDP DAEFIELVGL FEARGLSRET ATLAASELTE
KDAPAAHLAV ELNIDQDDVV SPWHAALASA VAFILGALLP MATILFLPHP ERIIWTFAAT
IFALAITGYV AAWIGGARRW RAVLRTVIGG ALALGATFLV GSLFGATVL