| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1728 |
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| Symbol | |
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| ID | 8380895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1876735 |
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| End bp | 1878492 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645004484 |
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| Product | trehalose synthase |
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| Protein accession | YP_003161677 |
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| Protein GI | 256832950 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCAAT CACATTCTGA CTTCCTCAAG CCAGCGACCG TTGGAGGGAC CAGCCCCTAC
CTCCACTCAG CCAGCCAATT TCCCGGCGTT GCCGGAGAAA CCTCCGGGCT GTCCAACGAC
CCGCACTGGT ACAAAACAGC TGTCTTCTAC GAAGTCATCG TTCGGGCATT TTCCGACACC
ACCCAATCAG GAGTCGGTGA CTTACGCGGA CTCATTGCCC GCCTCGACTA CCTTCAATGG
TTAGGCGTGG ACTGTCTATG GCTTCCCCCG TTCTACCCAT CCCCCCTCAA AGACGGCGGA
TACGATGTTG CCGACTACAC CTCCATTGCC CCTCAACTGG GAACCATGGA GGACTTTCAA
GAACTGATGA CCGAGGCACA CCGACGCGGT ATCCGCATCA TCATCGACCT CGTCATGAAC
CACACCTCAG ATCAACACCC CTGGTTCCAG TCCTCCCGAA ACGACCCAGA AGGACCCTAC
GGCGACTTCT ACGTCTGGAG TGATGACAAC ACCCGCTACG CCGACGCCCG CATCATCTTC
ACAGACACCG AAACGTCCAA CTGGACCTTC GACCCCGTAC GCCGCCAGTA CTACTGGCAC
CGGTTCTTCC ACCACCAACC CGACCTCAAC TTTGACAACC CCGACGTGCG TGACGCCATG
ATCGATGTGG CACGATTCTG GTGCTCCCAA GGAGTCGATG GCTTCCGGCT CGACGCAGTG
CCCTACCTCT TCGAAGCAGA AGGAACGAAC TGCGAAAACC TTCCCGAAAC GCACGCGTTC
CTGCGCGACC TGCGCCGAAT GCTCGACACC GAGTTCCCCG GTCGGATCAT GCTCGCGGAA
GCCAACCAAT GGCCAGAAGA CGTCATCCAC TACTACGGCA CCGACGAAGA ACCCGAATGC
CACATGTGCT TCCACTTCCC CGTCATGCCG CGCATCTACT ACGCAATCAA AGACGGTCGA
GCACAACAAA TCATTGACAT CCTCAATGAC ACCCCTGCGC TCAGTGCAGG ACAACAATGG
GGTACCTTTC TACGAAACCA CGACGAACTC ACCCTCGAAA TGGTCTCCAC CGAAGAACGT
GCCTCCATGT ACCGGTGGTT CGCACCAGAT CCACGGATGC GCGCCAACGT CGGAATCAGA
CGGCGCCTCG CCCCCCTGTT AGATAACAAC CGCAAAGAAA TCGAACTGGC CAACGCCCTC
CTCCTATCCC TGCCAGGAAG CCCCTGCCTG TACTACGGCG ACGAAATCGG CATGGGGGAC
AACATTTGGC TCGACGACCG CGACTCTGTG CGCACACCCA TGCAATGGAC TCCCGACCGT
AACGCTGGAT TCTCCTACGC AGACCCCGGC AAACTCTACC TTCCCGTTGT CCAATCACTG
GTCTACAACT ACCGTTCCGT CAACGTTGAA GCACAAGTAG AACAACCCTC ATCTCTGCTC
CACTGGACCC GCGGTATGCT CGCCGTGCGT AAACGCCACC CCGCATTTGG AGCCGGCGGA
TACGCATCCC TGAACTGCGA CGACGAATCA CTCTTTGCCT ACCTCCGATA CACCGACGAC
GAAAGCATTA CGTGCATCGT CAACTTCGCT GCCACTGCGC GGTCCGGGAA AGTCCACATC
CCCGGCAAAG CGGGTTACAC AGCAGTCGAT GTGTTTGGCG GGTCACCCAT CGGCACCGTC
GACGACAACG ACAACCTTCC CGTCATGCTC GGCTCGCGCG AGTTCTACTG GCTCGCACTG
ATCCCGGCAA GCGACTAG
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| Protein sequence | MTQSHSDFLK PATVGGTSPY LHSASQFPGV AGETSGLSND PHWYKTAVFY EVIVRAFSDT
TQSGVGDLRG LIARLDYLQW LGVDCLWLPP FYPSPLKDGG YDVADYTSIA PQLGTMEDFQ
ELMTEAHRRG IRIIIDLVMN HTSDQHPWFQ SSRNDPEGPY GDFYVWSDDN TRYADARIIF
TDTETSNWTF DPVRRQYYWH RFFHHQPDLN FDNPDVRDAM IDVARFWCSQ GVDGFRLDAV
PYLFEAEGTN CENLPETHAF LRDLRRMLDT EFPGRIMLAE ANQWPEDVIH YYGTDEEPEC
HMCFHFPVMP RIYYAIKDGR AQQIIDILND TPALSAGQQW GTFLRNHDEL TLEMVSTEER
ASMYRWFAPD PRMRANVGIR RRLAPLLDNN RKEIELANAL LLSLPGSPCL YYGDEIGMGD
NIWLDDRDSV RTPMQWTPDR NAGFSYADPG KLYLPVVQSL VYNYRSVNVE AQVEQPSSLL
HWTRGMLAVR KRHPAFGAGG YASLNCDDES LFAYLRYTDD ESITCIVNFA ATARSGKVHI
PGKAGYTAVD VFGGSPIGTV DDNDNLPVML GSREFYWLAL IPASD
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