| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1727 |
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| Symbol | |
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| ID | 8380894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1874621 |
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| End bp | 1876738 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645004483 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003161676 |
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| Protein GI | 256832949 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAACA CCTGCCCAAC CACTGCGAAA AGTCAGCCTG TTTCGGCTAG CGTTAATCCT
GTGACTCCAC AACGCCGACG TGCAGCAACA GTGACGAGCT CCCCAACCGC CCAGCCCGCC
GCGGGCATCG GCAGGATACC AATCCTCGAT GTCTGCCCGA CCGTGTCACA TGGCCGCTGG
GCGGCAAAAG CCGTTGTCGG CGAAATGGTC CCCATCGAGG CAACAGTGTT CCGAGAAGGT
CACGACGCAG TGGGGGCAAC AGCAGTGTTG TTGTCTCCCC GCGGGAAACG CCACACAGCC
CGCATGGTCG ATATCGCACC AGGACTTGAC CGCTTCCAGG GTTTCCTCGC CCCCACCGAA
CCCGGACGGT GGAAAATCAA AGTCGAAGCA TGGTCAGACC CCTATGGCAC CTGGGAACAC
GACGCCGGCG TCAAAATCGC TGCCGGAATC GACGCGGAAC TCATGTGCGC AGAAGGTGTC
CTGTTATTCC AACGCGCAGC ACGTCAACGC GGCATCACAC CCGAAGACAA AGCTGCGTTG
CGCTCCATTG TCGCGGCCCT TCGCGACACA ACATTGTCAC CACAAACCCG CTTTGAGGCA
GCAACTGCCC CACAGATCAC CGCGATCATG CGGTACCGGT CACCTCTTCG CGACCTTGTC
ACATCGTCAC AGACATACCC GTTGACTGTG CACCGGCCCC AAGCATTGTT TAACTCCTGG
TACGAGTTCT TCCCCCGCTC AGAAGGCGCA TACCGCACCG ACGACGGAAC ATGGGTTTCT
GGCACACTAC AGACCGCGAG CGAACGCCTT GGCGCCATCG CCGACATGGG TTTCGACACG
ATCTACCTCA CCCCGATCCA CCCGATCGGC ACAACAAACC GTAAAGGGCC CAACAACACA
CTGCACGCAG GCCCGAACGA CCCGGGTTCC CCCTACGGAA TTGGGTCACC CGAAGGCGGT
CACGACGCCA TCCACCCTGA CTTGGGCACA TTCGACGACT TTGACGACTT TGTCGAGCGC
GCTCGGTCCC ACAACCTCGA GGTCGCCCTC GACATTGCCC TGCAATGCTC CCCGGACCAC
CCCTGGGTCA AAGAACACCC CAACTGGTTC ACCACACGAG CTGACGGAAG CATCGCCTAC
GCCGAAAACC CGCCAAAAAA ATACCAAGAT ATCTACCCCC TGAACTTTGA CAACGACCCA
GAGGGGATCT ACCAAGAGAT CAACCGCATC ATCCGGTTGT GGATCTCCCA TGGCGTCACC
GCATTCCGTG TGGACAACCC TCACACAAAA CCGTTGAACT TCTGGGAGCG GCTCCTGGCA
GACATTGCCG CAGACCACCC CGATGTGCTC TTCCTGTCTG AAGCATTCAC CAAACCCGCG
ATGATGCGCA CCCTCGCGAC CATCGGGTTC CACCAGTCGT ACACCTACTT CACCTGGCGC
AACACCAAAC AAGAACTAGA AAGCTACCTC AAAGAAGTGT CCGGCCCAAT CGGCTCAACC
ATGCGCCCCT CCTTCTGGCC CACCACACAC GACATCCTGC CGCCCTACCT CCAACACGGC
GGAATCCCAG CCTTCGCCAT CCGCGCGATC ATTGCAGCGA CCGCATCACC ACTGTGGGGG
ATCTACTCCG GATACGAACT CGCCGAACGC ACACCACGTC CGGGAGCAGA AGAACTCATC
GACAACGAAA AATACCAGTA CACCCAACGC AACTGGTCAC GGACCAGCGA GATCGGTATT
GCACCCCTGA TCACCACGCT CAACACGATC CGACGCACAC ACCCAGCACT TCAACAACTC
CGTAATCTCA CCGTCCACCA CACCAGTGAT GACAACATTC TTGCCTTTTC TTCTCACCTC
CCGGCAGCTT TCGCCGACGG GGAAGATAAC ACCATCATCA CCGTCGTCAA CCTTGATCCA
CACAACACCA GAGAAGGAAC CGTGTGGCTC GACCTCGAAG CCTTAGGGCT ATCCAACGAC
ATCGCGGACA TAGGAACCCC TGTGTTTCGT GCACATGACC TGTTGAGCGG ACAACACTTT
GACTGGGGGC GTCAAGCGTT TGTCCGACTC AACCCCATTG CCAACTGCGC ACACATCATC
CACGTGAGGC CACTGTGA
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| Protein sequence | MGNTCPTTAK SQPVSASVNP VTPQRRRAAT VTSSPTAQPA AGIGRIPILD VCPTVSHGRW
AAKAVVGEMV PIEATVFREG HDAVGATAVL LSPRGKRHTA RMVDIAPGLD RFQGFLAPTE
PGRWKIKVEA WSDPYGTWEH DAGVKIAAGI DAELMCAEGV LLFQRAARQR GITPEDKAAL
RSIVAALRDT TLSPQTRFEA ATAPQITAIM RYRSPLRDLV TSSQTYPLTV HRPQALFNSW
YEFFPRSEGA YRTDDGTWVS GTLQTASERL GAIADMGFDT IYLTPIHPIG TTNRKGPNNT
LHAGPNDPGS PYGIGSPEGG HDAIHPDLGT FDDFDDFVER ARSHNLEVAL DIALQCSPDH
PWVKEHPNWF TTRADGSIAY AENPPKKYQD IYPLNFDNDP EGIYQEINRI IRLWISHGVT
AFRVDNPHTK PLNFWERLLA DIAADHPDVL FLSEAFTKPA MMRTLATIGF HQSYTYFTWR
NTKQELESYL KEVSGPIGST MRPSFWPTTH DILPPYLQHG GIPAFAIRAI IAATASPLWG
IYSGYELAER TPRPGAEELI DNEKYQYTQR NWSRTSEIGI APLITTLNTI RRTHPALQQL
RNLTVHHTSD DNILAFSSHL PAAFADGEDN TIITVVNLDP HNTREGTVWL DLEALGLSND
IADIGTPVFR AHDLLSGQHF DWGRQAFVRL NPIANCAHII HVRPL
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