Gene Jden_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1722 
Symbol 
ID8380889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1867772 
End bp1869010 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content61% 
IMG OID645004478 
Productaminotransferase class V 
Protein accessionYP_003161671 
Protein GI256832944 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.185065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGTCA ACCCATTAGA CTTAATCGCT GTGAAGCCCG CACGGACCAG TTACCTTGAT 
CATGCCGCCA CGACCCCGAT GGTTCCGGCA GCTATTGCTG CGTATGCGGA GCAGTTAGCC
GTGGTGGGTA ATCCCTCGTC GTTGCATGCC GCGGGACGGC GGGCACGGAG CGTGGTCGAG
GCAGCCCGTG AGGAGCTAGC CTCGATCTAC GGGTGCCGGC CTAGTGAGAT CATTGTCACC
TCGGGGGGTA CTGAGGCAGA CAACTTAGCG GTGAAGGGGA TCTTCCGGGC TCGTCGAGCT
CAGGATGGGC GCAGGTCGCG CATCGTGATT TCTGCTGTGG AGCATCATGC GATTCTTGAT
CCTGCGCATG CTCTGGCTCA GGATGATGGC GCGCAGGTTG TTGCGCTTCC GGTTGACGAG
CGGGGGTTGG TGGACCCGTT GGCGTTGGAA GCGGAGTTGC GTGAGCATGC CAGTGACACG
GCGTTGGTGT CGGTCATGTG GGCAAATAAC GAGGTGGGGA CAATCCAGCC GATTGCGGAG
CTTGCGCAGA TCGCTCACCG TTACGGTATC CCGATGCACA CCGATGCTGT GCAGGCGGCC
GGGCACTTGG CCGTGAATTT TCAAGACAGC GGTGTGGATG CTCTGACGGT GACAGCCCAC
AAAATTGGTG GGCCTGTGGG CGTGGGGGCG TTGATTGCGC GCCGCGACCT AGAGATGTAT
CCGGTTCTTC ATGGTGGCGG TCAGGAACGA CAGGTCCGGT CAGGCACTAT CGATGCGGCA
GCTATTCATT CCTGGCGTGT TGCTGCCGTG CAGGTGGCAA GCGAGCTGCC GGCGCGGGTG
GAGCGGGAGC GCGAGTTGCG CGATCAGCTG TTGGCGCGCA TCGTTGAGGC TGTGCCTGAT
GCGCAGGTTC GTGGGGTTGA CCCGCAGGGG CCGGACGCGC ATATGCGGCT CAGTTCCATT
GCCCATGTGA CCTTTCCCGG CTGTGAAGGC GATTCCCTCA TCTATTTGCT TGATTCACAT
GGGGTGCAGG CTTCGACCGG GTCAGCGTGT CAAGCGGGAA TACCGCAGCC CTCCCACGTG
TTGCTTGCGA TGGGTCTTGA CGAACTCACT GCCCGCGGGG CGTTGCGTTT CTCCTTGGGG
GCGACCAGTA CTCAAGAAGA TATTGACCAT GTCATTGAGG TGTTACCGAC GGTGGTTGAG
CGTGCTCGGC GTGCTGGGCT TGCCACAACT GGCCGGTAG
 
Protein sequence
MEVNPLDLIA VKPARTSYLD HAATTPMVPA AIAAYAEQLA VVGNPSSLHA AGRRARSVVE 
AAREELASIY GCRPSEIIVT SGGTEADNLA VKGIFRARRA QDGRRSRIVI SAVEHHAILD
PAHALAQDDG AQVVALPVDE RGLVDPLALE AELREHASDT ALVSVMWANN EVGTIQPIAE
LAQIAHRYGI PMHTDAVQAA GHLAVNFQDS GVDALTVTAH KIGGPVGVGA LIARRDLEMY
PVLHGGGQER QVRSGTIDAA AIHSWRVAAV QVASELPARV ERERELRDQL LARIVEAVPD
AQVRGVDPQG PDAHMRLSSI AHVTFPGCEG DSLIYLLDSH GVQASTGSAC QAGIPQPSHV
LLAMGLDELT ARGALRFSLG ATSTQEDIDH VIEVLPTVVE RARRAGLATT GR