| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1711 |
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| Symbol | |
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| ID | 8380878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1847515 |
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| End bp | 1849230 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645004463 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_003161660 |
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| Protein GI | 256832933 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.835753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.93934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGATG ACAGACACAC ACAAGGACCG ACGCCCGGTA AACCACGTTC ATGGCGTGTG
ACAGATGGGC TTGAAGCGAC GGCTTCACGG GGGATGTTGC GCGCAGTCGG GTTGGGCGAT
GATGATTTTG CCAAACCCCA AATTGGGGTG GCATCGTCGT GGAACGAAAT AACCCCGTGC
AACTTGTCGT TGGATCGTCT TGCGGGGGCG GTGAAAGAGG GTGTGCACGC CGCAGGTGGG
TTCCCGTTGG AGTTTGGCAC AATTTCGGTG TCGGATGGTA TCTCCATGGG ACATGAGGGG
ATGCACTATT CGTTGGTTTC CCGTGATGTC ATTGCTGATT CTGTGGAAGT TGTCATGGAA
GCGGAACGAC TCGACGGTTC CGTACTTCTA GCCGGTTGTG ATAAGTCGTT GCCGGGGATG
CTGATGGCGG CTGCGCGTCT CAATGTCTCG AGTGTGTTCT TGTATGCCGG ATCGATCATG
CCGGGGTGGG TCAAACTTAG CGATGGAACG GAAAAAGACG TCACCCTCAT TGACGCGTTT
GAGGCAGTAG GGGCGTGTGT GCGCGGGCTG ATGTCACGTG AGGATGTGGA TCGCATCGAA
CGTGCTATTT GCCCTGGTGA GGGTGCATGC GGTGGGATGT ATACCGCAAA TACGATGGCT
GCTGTGGCCG AGGCATTGGG AATGTCGATC CCGGGTTCTG CGGCGCCTCC GAGTGCGGAT
CGCCGTCGGG ATATGTTTGC TCGTCGAAGC GGTCAGGCGG TGGTCGACTT GCTCAATGCG
GGGATAACCG CACGTGACAT TATGACGAAG CCTGCGTTTG AGAATGCTAT TGCTGTGGTG
ATGGCTCTGG GTGGGTCAAC GAATGCGGTG TTGCATTTGT TGGCGATTGC TCACGAAGCT
GAGGTTGATT TGTCGTTGGA TGATTTTGCG GCGGTTGCTC GCCGCGTTCC GCACCTCGCG
GATGTGAAAC CGTTTGGTCG TTACGTGATG AATGATGTGG ATCGCATCGG TGGTATCCCG
GTTGTCATGA AGGCGCTTGC TGATGCGGGG CTGCTTGATG GGGATTGTCT GACAGTGACA
GGGCGAACGG TGGCGGAGAA CCTCGCCGAT ATTGCTCCTC CGGACCCTGA CGGGGTCATT
CTTCGGGTGA TGGATCAGCC GATTCATCCC ACGGGAGGGA TCACGATTTT GCATGGGTCG
TTGGCGCCTG AGGGGGCGGT GGTGAAGTCT GCTGGTTTTG ACCGGTCGGT GTTCACGGGG
ACCGCCCGGG TGTTTGAGGG GGAACGTGCC GCCATGGATG CGTTGGAGGA TGGGACTATT
CGGGCTGGGG ACGCGGTGGT GATCCGTTAT GAGGGGCCGA AGGGTGGCCC TGGGATGCGA
GAGATGCTTG CGGTGACTGG CGCGATTAAG GGGGCTGGGC TGGGGCGAGA TGTGCTGTTG
TTGACTGATG GGCGTTTTTC CGGTGGGACA ACGGGACTGT GCGTGGGGCA TATTGCTCCG
GAGGCTGTGG ATGGTGGCCC TATTGCGTTG GTGCGTGATG GGGACACGAT CCGGTTGGAC
GTGGACGCGG GCACTCTCGA TGTGCTTGTT GATGAGGGGG AGATGGCGGC CCGGGCTGTT
GATTGGGTTC CGGCATCGAG GCCGGTCAAG CGCGGCGTGT TGGCGAAGTA CGCACAACTT
GTTGGGAGTG CGTCTCGAGG TGCGGTCCTT GGGTGA
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| Protein sequence | MVDDRHTQGP TPGKPRSWRV TDGLEATASR GMLRAVGLGD DDFAKPQIGV ASSWNEITPC
NLSLDRLAGA VKEGVHAAGG FPLEFGTISV SDGISMGHEG MHYSLVSRDV IADSVEVVME
AERLDGSVLL AGCDKSLPGM LMAAARLNVS SVFLYAGSIM PGWVKLSDGT EKDVTLIDAF
EAVGACVRGL MSREDVDRIE RAICPGEGAC GGMYTANTMA AVAEALGMSI PGSAAPPSAD
RRRDMFARRS GQAVVDLLNA GITARDIMTK PAFENAIAVV MALGGSTNAV LHLLAIAHEA
EVDLSLDDFA AVARRVPHLA DVKPFGRYVM NDVDRIGGIP VVMKALADAG LLDGDCLTVT
GRTVAENLAD IAPPDPDGVI LRVMDQPIHP TGGITILHGS LAPEGAVVKS AGFDRSVFTG
TARVFEGERA AMDALEDGTI RAGDAVVIRY EGPKGGPGMR EMLAVTGAIK GAGLGRDVLL
LTDGRFSGGT TGLCVGHIAP EAVDGGPIAL VRDGDTIRLD VDAGTLDVLV DEGEMAARAV
DWVPASRPVK RGVLAKYAQL VGSASRGAVL G
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