Gene Jden_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1705 
Symbol 
ID8380872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1841058 
End bp1841768 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content54% 
IMG OID645004457 
ProductABC transporter related 
Protein accessionYP_003161654 
Protein GI256832927 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.143912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC AACTCGCTCA ACTTACGGTG TCGCATCGGC GCTCTCACTT CACACTAGGT 
CCCATAACCG CGGAGTTTTC TCCCGGCATC ACCGGGATCG TGGGTGTGAA TGGTGCTGGT
AAGAGCACCC TCTTCAACAC CATCGTCGGA ACGTTGCGTC CCTCCTCTGG CCGCGTCATG
CACCGTGACA CCAACATTGG ATATTTACCG CAGAACCCTA TCTTTCCCAA GAATGCAACT
GTCCGTGACG TGTTGACATT CTCTGCATGG TTACACATGC TCAAGGATCC ACAAGAACGG
ATTACTGACC TCATCACACG GCTTGGTTTG GAAGAACACG CAACTAAGCG CACGTCGCAA
TTATCAGGAG GCATGCAGCG CCGACTTGGA ATAGCACAGG CTCTCGTCCA CGACCCGGCG
ATTCTTCTCC TTGATGAACC CACTGCAGGG CTGGACCCAG TTCAACGCAT CGCAGTCAGG
ACAACTATCG AGGAAGAGTT GGGGAATAAA ACAGTTCTCC TGTCCACCCA CCTCGTGGAA
GATATCCGGC ACCTCGCCTC ACAACTACTT GTCCTTGATC AAGGGCAGGT CGTTTTCAAT
GGCAGCGTCG ATGAACTTGA ATCAACAGCG CGCGACACAC ATCTTGGAGC TACCCCACTT
GAGGTGGCAC TCAACCAGCT CTACACGGGA AGCGGGAAAG TAGCACCGTG A
 
Protein sequence
MTLQLAQLTV SHRRSHFTLG PITAEFSPGI TGIVGVNGAG KSTLFNTIVG TLRPSSGRVM 
HRDTNIGYLP QNPIFPKNAT VRDVLTFSAW LHMLKDPQER ITDLITRLGL EEHATKRTSQ
LSGGMQRRLG IAQALVHDPA ILLLDEPTAG LDPVQRIAVR TTIEEELGNK TVLLSTHLVE
DIRHLASQLL VLDQGQVVFN GSVDELESTA RDTHLGATPL EVALNQLYTG SGKVAP