Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1705 |
Symbol | |
ID | 8380872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1841058 |
End bp | 1841768 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645004457 |
Product | ABC transporter related |
Protein accession | YP_003161654 |
Protein GI | 256832927 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.143912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC AACTCGCTCA ACTTACGGTG TCGCATCGGC GCTCTCACTT CACACTAGGT CCCATAACCG CGGAGTTTTC TCCCGGCATC ACCGGGATCG TGGGTGTGAA TGGTGCTGGT AAGAGCACCC TCTTCAACAC CATCGTCGGA ACGTTGCGTC CCTCCTCTGG CCGCGTCATG CACCGTGACA CCAACATTGG ATATTTACCG CAGAACCCTA TCTTTCCCAA GAATGCAACT GTCCGTGACG TGTTGACATT CTCTGCATGG TTACACATGC TCAAGGATCC ACAAGAACGG ATTACTGACC TCATCACACG GCTTGGTTTG GAAGAACACG CAACTAAGCG CACGTCGCAA TTATCAGGAG GCATGCAGCG CCGACTTGGA ATAGCACAGG CTCTCGTCCA CGACCCGGCG ATTCTTCTCC TTGATGAACC CACTGCAGGG CTGGACCCAG TTCAACGCAT CGCAGTCAGG ACAACTATCG AGGAAGAGTT GGGGAATAAA ACAGTTCTCC TGTCCACCCA CCTCGTGGAA GATATCCGGC ACCTCGCCTC ACAACTACTT GTCCTTGATC AAGGGCAGGT CGTTTTCAAT GGCAGCGTCG ATGAACTTGA ATCAACAGCG CGCGACACAC ATCTTGGAGC TACCCCACTT GAGGTGGCAC TCAACCAGCT CTACACGGGA AGCGGGAAAG TAGCACCGTG A
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Protein sequence | MTLQLAQLTV SHRRSHFTLG PITAEFSPGI TGIVGVNGAG KSTLFNTIVG TLRPSSGRVM HRDTNIGYLP QNPIFPKNAT VRDVLTFSAW LHMLKDPQER ITDLITRLGL EEHATKRTSQ LSGGMQRRLG IAQALVHDPA ILLLDEPTAG LDPVQRIAVR TTIEEELGNK TVLLSTHLVE DIRHLASQLL VLDQGQVVFN GSVDELESTA RDTHLGATPL EVALNQLYTG SGKVAP
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