| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1704 |
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| Symbol | |
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| ID | 8380871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1839736 |
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| End bp | 1840782 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645004456 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_003161653 |
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| Protein GI | 256832926 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.106522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA ACATCAAACT GGCAGTCGTC GCTGGTGACG GCATCGGTAT CGAAGTTGTC
GAACAGGGCC TTGTGGCACT GGATGCGGCA CTAGCGGGTA CGCAGGTGTC GGTGGAACCC
ACCGAGTTCA ACCTGGGTGC GCAGCGGTGG CACACCACCG GGGAAACGCT GACTGATTCC
GACCTTGACG CGATCCGCCA GCATGATGCG ATTCTTCTTG GTGCGATTGG TGATCCGAGT
GTTCCGTCCG GTGTTCTTGA GCGTGGACTA CTCCTGAAGC TCCGTTTCAG TCTTGACCAC
TACGTTAACC TGCGCCCCGG AAAGCTCTAC CAGGGCGTCT CCTCCCCTTT GGCTAACCCA
GGGGACATTG ATTTCGTTGT CGTCCGCGAA GGAACAGAAG GCCCCTACGT GGGTAACGGT
GGCGCCATTC GTGTGGGAAC ACCCCATGAA GTAGCGAACG AAGTGTCCGT GAACACGGCC
TTTGGTGTCG AACGGGTTGT GCGAGACGCC TTCACACGAG CCGCTGCACG CGAACGCAAA
CACCTCACAC TGGTGCACAA ACACAATGTT CTCGTCCACG CGGGTCACCT GTGGCGCCGC
ACAGTCGAGC GAGTCAACGA AGAGTTCCCC CAGGTCACTA CTGATTACCT CCACGTTGAT
GCAGCAACCA TCTTCCTGAC AACAAACCCC TCACGCTTTG ATGTCATCGT GACTGACAAC
CTCTTTGGTG ACATTTTGAC CGACCAAGCT GCCGCGATCA CCGGTGGTAT TGGCCTTGCG
GCGTCGGCGA ACATTAACCC CGACCGCACC GCACCCTCCA TGTTCGAGCC TGTTCACGGT
TCAGCACCGG ACATTGCTGG GCAAGGGAAG GCTGACCCCA CGGCAACAAT TCTGTCGGTA
GCACTTATGC TCGATCACCT GGGTTACCAC ACAGAATCTG CGCGCGTTGA AGCTGCAGTC
GCAGCGGACC TCGCCGAACG TGGCACCACG CCACGATCCA CACGTGAGGT CGGTCAGGCA
ATCACCGAGC GCATCGGTGG TCTGTAA
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| Protein sequence | MTKNIKLAVV AGDGIGIEVV EQGLVALDAA LAGTQVSVEP TEFNLGAQRW HTTGETLTDS
DLDAIRQHDA ILLGAIGDPS VPSGVLERGL LLKLRFSLDH YVNLRPGKLY QGVSSPLANP
GDIDFVVVRE GTEGPYVGNG GAIRVGTPHE VANEVSVNTA FGVERVVRDA FTRAAARERK
HLTLVHKHNV LVHAGHLWRR TVERVNEEFP QVTTDYLHVD AATIFLTTNP SRFDVIVTDN
LFGDILTDQA AAITGGIGLA ASANINPDRT APSMFEPVHG SAPDIAGQGK ADPTATILSV
ALMLDHLGYH TESARVEAAV AADLAERGTT PRSTREVGQA ITERIGGL
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