Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1672 |
Symbol | |
ID | 8380840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1803429 |
End bp | 1804154 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645004422 |
Product | hypothetical protein |
Protein accession | YP_003161622 |
Protein GI | 256832895 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00865056 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0106556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTGC CTTTCGCGGT GCTCGAGTCA CCACAGGACC TCGCAGAATT TTATGACAAT GTGCTCCTTC CGTCTTTTCC TGCAACGGAG CTGGTCACAA AAGACGAATT TCTCGAAGCC TGCACACAAC GTTTCCTGCA CGTCATTGGT GCAGTAGAAG ATGGAAAAAT CATTGCCGGT GCGGTAGGAA CAGTACCCAC CCACGAAGGC GTCATGATGC TGCTGTACCT CGCCCTGCAA CCCGGGCTCC GTGGAGCAGG AATCGGAGGA CGGCTCGTGG ACTGTGCCGT TGCGAAATGG TGTGACGAGT TCTCCCCCAC CATGATCCTC GCCGAGGTGG AACACCCCAC CTACCACCCC AGTTCCGATG ACCACGGTGA CCCTGCTGCC CGCATGCGCT TCTACGCAAA GCACGGCGGC CGCATCCTTG ACATCCCCTA CTTCCAGCCA GCAATCCGCG ACGGGGAACC ACCTGTTCCC GCGCTCATGC TGGTCACCTT GTGGGTTGCC CCTGAAGCCT TTATTGATGA GGACACCATC ATTGCGTGGC CACTTCGAGC AGCCCTTCGC CGTGAAATAG TTGACACCTG CCCAGAAGGG TTTGGTCCAG CTATTGCTGT TGCAGAATCA GTTGCAGGTG ACGCGGTACG GCTGTGGCAG CCCACAGACA TCGACCGAGT CCCCGTCGGC CTATTTGACC CCAGCGAGTA TCACGCGCAC GTGTAA
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Protein sequence | MTLPFAVLES PQDLAEFYDN VLLPSFPATE LVTKDEFLEA CTQRFLHVIG AVEDGKIIAG AVGTVPTHEG VMMLLYLALQ PGLRGAGIGG RLVDCAVAKW CDEFSPTMIL AEVEHPTYHP SSDDHGDPAA RMRFYAKHGG RILDIPYFQP AIRDGEPPVP ALMLVTLWVA PEAFIDEDTI IAWPLRAALR REIVDTCPEG FGPAIAVAES VAGDAVRLWQ PTDIDRVPVG LFDPSEYHAH V
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