| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1660 |
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| Symbol | |
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| ID | 8380829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1797228 |
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| End bp | 1798196 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645004411 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_003161611 |
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| Protein GI | 256832884 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.653624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0436541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGATTT TGGTGCCCAG CACAGTTCAT GATGAGATTC GGGTTCCACC TGGGGTGACG
GTGGCCCGAT ACGACCCGCG TGTGGAGGTT CCCGCTGAGC ACCATGACAC ACAGGTTCTT
GTTGCGTGGG GGAATTCTCG GAAAAATTTG GCCGGGTGCG CCCGCGACTT GGCGAACCTC
CGATGGGTGG CTGCGCTGTC AGCAGGAGTG GACGGGGTTA TTCACGCCGG TTTTGCCCCT
CATGTGATGA TCACGAGCGG GCGTGGGTTA CATGATCGGC CAGTGGCTGA ACACACGCTC
ATGATGATTC TTGCGGCGGT GCGCCGGTTT GATCTGATGC ATGAGGCGCG GTGTGATCAC
CGGTGGGATC TTTCCCTTGG TGGCGTGCAG CACCCTGGTT TGTTAACGGA CCGCACACCC
GGTGATGGCG GGCTCCCCGG CTTAGGCACC ATTGATGGAG CAAACATCAT GATTTGGGGG
TTTGGGTCTA TTGGGCAAAC GTTGGCCTCT TACGTCACAA TGCTGGGTGC GCGGGTACTC
CCGGTTGCGC GCAGTGAAGG GGACCGAGCA GGCTTCCACA CCATGACCCC TGACCACATG
GGTGAGGTGC TGCCCGTCAC GGACATCCTT GTCTCCGTGT TGCCGGCAAC CGCTGACACT
TTAGGGGTAG CAAACCGTCA AATTTTCGAT GCGCTCCCCA CCCACGCGTG GTTCGTGAAC
GTGGGCCGTG GCAGCGTTGT CAACGAGGAC GACCTAGTTG CCGCATTACA TTCAGGCTCC
CTTGGTGGAG CAGCCCTGGA TGTCACCGAC CGTGAACCAC TCCCAGACTC TTCCCCATTA
TGGGACGCCC CCAACCTGAT CCTTACCCCG CACGCTGCAG GTGGACGCCC AGAAGGGGCT
GGTGAGTTCC TGTCCACAAA CATTGAGGTA TTCCATGCAG GCGGCACCCC CGCCAACCTC
GTCACCTAG
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| Protein sequence | MKILVPSTVH DEIRVPPGVT VARYDPRVEV PAEHHDTQVL VAWGNSRKNL AGCARDLANL
RWVAALSAGV DGVIHAGFAP HVMITSGRGL HDRPVAEHTL MMILAAVRRF DLMHEARCDH
RWDLSLGGVQ HPGLLTDRTP GDGGLPGLGT IDGANIMIWG FGSIGQTLAS YVTMLGARVL
PVARSEGDRA GFHTMTPDHM GEVLPVTDIL VSVLPATADT LGVANRQIFD ALPTHAWFVN
VGRGSVVNED DLVAALHSGS LGGAALDVTD REPLPDSSPL WDAPNLILTP HAAGGRPEGA
GEFLSTNIEV FHAGGTPANL VT
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