| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1657 |
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| Symbol | |
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| ID | 8380826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1793397 |
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| End bp | 1795178 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645004408 |
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| Product | ABC transporter, CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding protein CydC |
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| Protein accession | YP_003161608 |
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| Protein GI | 256832881 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0306347 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACGTT CAGGTGGTGT TGGTGAGCGC GTTGGCGCGG TGCGTGACTT GCGGGTTGCT
CTTGGTTTGC TTGATGTATC GCCGTGGGCT GTGATCAAAG CGGTGACGGC CGGTGTGGTG
GCGTTGGGTA GTGCCATTGC GTTGGGGGCG GTGTCTGCAT GGTTGATTGC TCGTGCCTCG
CAGATGCCCC CGGTCATGAT GTTGTCGGTG GCGACGGTGG CGGTGCGTGC CTTTGGGGTG
ACCCGTGGGT TGTTCCGCTA CTTGGAGCGG CTTGCGTCGC ACCAGGTGGC GCTGTCTGGG
ATGGCTTCGT TGCGCACGAA CGTGTATGAC AGGTTGTCGC GGGGAAATAT TGCGGCGGTG
ACGTCGGTGT CCCGTGGTGA TTTGATGACG CGTGTGTCGG CTGATGTTGA TGCAGTGGGC
GATGTCATTG TGAAAGCGGT GATCCCCGGT GCGGTTGCGG CTGTGTTGTC GGTGGGGTCG
TTGCTTCTGA TTGGTTCGTT GTATCCACCT GCTGCACTGA CGTTGGCTGT GTGCATGATC
CTGGCTGGTG TGGTTGCCCC GTGGTTGGCG CAGCGCGCTG GTCGCGGTTC CGAGCAACAG
ATCTCTAATG CGCGTTCCGG TATTTCTGAG GTCGCCCATG ATCTGCTCCA CTCCCCTGGG
CAGGTTCTCG TGCATGGGGA TGACACCGCA CTTGTTCGTT TGTTGGGTGA GCGGGAACGG
TCACTTGACG ATGCGCTGGA ACGTAATTCC CGACTTGATG CGCTGGCACA GTTTGTGTTT
GTGTTCGCGG TTGTCGCATC GGCTGTCAGT GCGGCGGTCG TGTCGATTCC CGCGACGAAC
GCCGGGTTGT TGTCCCCGGT GGCGTTGGCG GTTGTGGTGT TGACCCCCCT CGCGGTGTTT
GAGATTCATC AAGGGTTGCC GGCTGCAGCG TTGCAGTTGC ACACCTCAGC GACCGCGGCC
CGGCGTATTG TGGCGTTACT TGACGATGCG GCACGCCCCT TGGATGACAC GGCCACGGAT
GATCTTTCTG CGGTGTCTGC TCACCCGACC TTGGTTGCTG AGGGGCTTGC GGCTGGGTGG
CCTGGTCACA CGGTGGTGTC TGGGGTGTCT TTGACGGCGC TGCCTGGGCA GTCCATTGCG
TTGGCTGGAC CTTCGGGGAC TGGGAAAACG ACCTTGCTGT ATACGTTGGC GGGGTTGCTT
CCAGCACATG CGGGCACGGT CATGGTGGAT GGGGCGCGCA TTGGTCCGGC GAACCAGCAC
GACGCCGCAG CGCATGTTGT GGTCGTGGCT GAGGATGACC ATGTTTTTGA CACCACGATT
CTTGAGAATC TGCGGGTTGC TCGCGGAGAC GTCACCCCTG ACGATGCGCG TGCCGCATTG
GCTGCGGCCG GGTTGGCGCA GTGGGTTGAG GGGTTGCCTG AAGGGCTTGA CACTGTGTTG
GGACCGGATG GGACCACGAT GTCTGGTGGG GAGCGTCGGC GTTTGTTGGT GGCTCGGGCG
TTGTGTTCCT CCGCTCCGAT TGTGTTGTTT GACGAACCTG GTGAGCACCT TGACCCAGAA
ACAGCGGACA CGGTAATCAC TGATCTTTTG ACTACGGTGG CCAACGATCA CGGGCGCACT
GTTGTTGTGG CCACTCACCG GCTCACCCCG TTGCGTCATG CGTCAACCGT GGTGTACCTG
GAGGATGGGG GCATTGCTGC GCGCGGTTCG CATGAGGAAC TTGTGGCAGG CCATGCTGGT
TACCGTCGTG CCGTCGACGC TGAGGCTCCG GTAGTCCAGT AA
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| Protein sequence | MTRSGGVGER VGAVRDLRVA LGLLDVSPWA VIKAVTAGVV ALGSAIALGA VSAWLIARAS
QMPPVMMLSV ATVAVRAFGV TRGLFRYLER LASHQVALSG MASLRTNVYD RLSRGNIAAV
TSVSRGDLMT RVSADVDAVG DVIVKAVIPG AVAAVLSVGS LLLIGSLYPP AALTLAVCMI
LAGVVAPWLA QRAGRGSEQQ ISNARSGISE VAHDLLHSPG QVLVHGDDTA LVRLLGERER
SLDDALERNS RLDALAQFVF VFAVVASAVS AAVVSIPATN AGLLSPVALA VVVLTPLAVF
EIHQGLPAAA LQLHTSATAA RRIVALLDDA ARPLDDTATD DLSAVSAHPT LVAEGLAAGW
PGHTVVSGVS LTALPGQSIA LAGPSGTGKT TLLYTLAGLL PAHAGTVMVD GARIGPANQH
DAAAHVVVVA EDDHVFDTTI LENLRVARGD VTPDDARAAL AAAGLAQWVE GLPEGLDTVL
GPDGTTMSGG ERRRLLVARA LCSSAPIVLF DEPGEHLDPE TADTVITDLL TTVANDHGRT
VVVATHRLTP LRHASTVVYL EDGGIAARGS HEELVAGHAG YRRAVDAEAP VVQ
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