| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1655 |
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| Symbol | |
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| ID | 8380824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1790638 |
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| End bp | 1791705 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645004406 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_003161606 |
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| Protein GI | 256832879 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.316394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0125839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCA GTATTCTGTG GTTCATCCTC ATCGCGGTCC TGTGGACCGG ATACCTCGTC
CTTGAAGGCT TCGACTTCGG GGTCGGTATG CTCCTTCCCG TCCTAGGAAA GAGCGAACGC
GAACGCCGTG CAGTGATCAA CACGATCGGC CCCGTGTGGG ACGGCAACGA AGTGTGGCTC
CTCACCGCAG GTGGGGCAAC CTTCGCGGCG TTCCCCGAGT GGTACGCCTC GATGTTCTCC
GGTTTCTACC TGCCGCTGCT GTTCATCTTG TTCGCTCTCA TTTTTCGCGG CATGGCCTTC
GAATACCGGT CCAAAATTGA AACACCACGC TGGAAAGCCT GGTGTGACTT TGGGATCATC
TTTGGTTCGT GGACTCCCGC GATCCTGTGG GGTGTTGCGT TTGCGAACCT GGTCCGTGGA
GTGGAACTGA ACGACAACTA CGACTTCGTC GGGTCGTTCT TCTCCTTGCT GTCGCCGTAT
GCCCTCCTTG GAGGGGCGGT CACGTTGTTG TTGTTCCTTG CGCACGGCGC GTTGTTCCTT
GCCTTGAAGA CAGACGGGAA GATGCGCGTT GACGCCAACC GGTTAGCCTC CCGCTTCCTC
GCAGGCGCTA TTCTTGCTGG CGGCGTGTGG GTTGTGTGGA CTCAGCTCGG GTACGGTGCT
GGGTGGACAT GGATCGCCAC CGGTGGCGCT GCCGCCGGAC TGGTTCTGGC GTGGTTGTTC
AACAAGGTGG GTCACGAGGG CCGCGCATTT GCCGCATCGG CTGCCGCGAT CTTGGCTGCT
GTGGTGCTGA TCTTTGGGTC GCTCTACCCG AACGTCATGC CTGACATTAA CGGCATCAAT
AACCTCACCA TCGAGAATGC GTCCTCGACT GACTACACCC TGACGATCAT GACGTGGGTG
GCTGTGCTCC TCACCCCCAT TGTTCTGCTC TACCAAGGGT GGACATTCTG GGTGTTCCGT
AAACGGATCA AGGTAGAACA CATCCCTGAC CCCATCGGTC TTCCGAGTTT GCGGGTCCCC
CGGGACACCC CAGGCGCCCC GGCACCCAAC TCCACGGACA AGGCATAG
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| Protein sequence | MELSILWFIL IAVLWTGYLV LEGFDFGVGM LLPVLGKSER ERRAVINTIG PVWDGNEVWL
LTAGGATFAA FPEWYASMFS GFYLPLLFIL FALIFRGMAF EYRSKIETPR WKAWCDFGII
FGSWTPAILW GVAFANLVRG VELNDNYDFV GSFFSLLSPY ALLGGAVTLL LFLAHGALFL
ALKTDGKMRV DANRLASRFL AGAILAGGVW VVWTQLGYGA GWTWIATGGA AAGLVLAWLF
NKVGHEGRAF AASAAAILAA VVLIFGSLYP NVMPDINGIN NLTIENASST DYTLTIMTWV
AVLLTPIVLL YQGWTFWVFR KRIKVEHIPD PIGLPSLRVP RDTPGAPAPN STDKA
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