| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1654 |
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| Symbol | |
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| ID | 8380823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1789126 |
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| End bp | 1790616 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645004405 |
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| Product | cytochrome bd ubiquinol oxidase subunit I |
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| Protein accession | YP_003161605 |
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| Protein GI | 256832878 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.229629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00759972 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACCCGC TCGATATCGC ACGGTGGCAG TTCGGCATCA CCACCGTCTA CCACTTTTTC
TACGTCCCCC TCACCATCGG ACTCGCGCCG CTGGTCGCCA TCATGCAGAC GATGTGGGTG
CGCACTCAGG ACGAACGGTG GCTCAAGCTC ACCAAGTTCT TTGGCAAACT CCTCCTCATC
AACTTCGCGA TCGGTGTGGT GACCGGGATC GTGCAGGAGT TCCAATTCGG GATGAACTGG
AATGAGTACT CCCGTTTTGT GGGCGACGTC TTTGGTGCAC CACTGGCTAT GGAGGCACTC
GCTGCGTTCT TCGTGGAATC AACATTCCTT GGCCTTTGGA TCTTTGGGTG GGACAAACTC
AATAAGAAGA TCCACCTCGC CTGTATTTGG GCTGTTGCAG TCTCCACTGC GTTGTCGGCG
TACTTCATCT TGGCCGCGAA CTCGTGGATG CAACACCCCG TGGGTGCAGT GTTCAACCCG
GAGACAGGGC GCGCTGAGAT GGTCGACATT GTCGCCGTCC TCACCAACTC CACTGTGCTT
GCCGCCTTCC CGCACACCAT CACCGCCGCG TGGCTCACAG CAGGAACATT TGTTGCCGGT
ATCGCCGCAT TCTGGATGGT CAAAGAAGCA CGACGAGGCC GCGACGATGT TGCTCGCTCC
ATTTACAAAC CAGCACTGAA CCTTGGGCTC GTCACCATGC TCATCGCCGG AGTTGGCCTC
GCCATCTCTG GTGACTTCCA AGCCAAACTC ATGTTCGAGC AACAACCCAT GAAGATGGCT
GCCGCCGAAG CCCTTTGCAC CACCCCTGAA GGCGGCGCTC CTTTCTCCAT CCTCACCATC
GGTGACCTCA CCAACGACTG CGAATCAGTG AACCACGTCC TGGAAATCCC CGGACTGACC
AGCTTCCTCG CAGACGGTGA CTTCAACGCA CAACTACGCG GCATCGACGA ACTGCAGGAG
TACTACACCG AACGGTACGG AGATGTTGGA CCAGACGGTG AACCCATCGA CTACAGCCCA
AACCTGGCCA TCACCTACTG GTCGTTCCGC CTCATGATTG GTTTTGCCGC ATTCTCCGCA
GCGCTGGCAG CCGCCACCAT GTGGTTGACC CGCAAGGGCC GCATCACCAA TAAGAAGTGG
TTCGCCCGCC TGGGACTGAT CGCAATCCCC ACCCCCTTCA TCGCATCAGC TTTCGGGTGG
ATCTTCACCG AAATGGGACG CCAACCCTGG GTAGTTGCGC CAAACCCCAC GGGGATCGAC
GAAATCCGGA TGCTCACCTG GGGCGCGGTG ACCACCAACC AATCTGCGGG GGTCATGCTG
TTCTCGCTCA TTGCGTTCAC GGTGATCTAC ACCTTCCTCA CAGCGATATG GGGAATGCTT
ATCTGGCGGT ACATGGCCCA CGGGGCACCC GAAACCGTCC ACGACGAATC ACCCGAAGCC
AACCCCGACC GGGCCAACGA CGCGGACGCA CCGCTGTCGT TCGCGTACTG A
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| Protein sequence | MDPLDIARWQ FGITTVYHFF YVPLTIGLAP LVAIMQTMWV RTQDERWLKL TKFFGKLLLI
NFAIGVVTGI VQEFQFGMNW NEYSRFVGDV FGAPLAMEAL AAFFVESTFL GLWIFGWDKL
NKKIHLACIW AVAVSTALSA YFILAANSWM QHPVGAVFNP ETGRAEMVDI VAVLTNSTVL
AAFPHTITAA WLTAGTFVAG IAAFWMVKEA RRGRDDVARS IYKPALNLGL VTMLIAGVGL
AISGDFQAKL MFEQQPMKMA AAEALCTTPE GGAPFSILTI GDLTNDCESV NHVLEIPGLT
SFLADGDFNA QLRGIDELQE YYTERYGDVG PDGEPIDYSP NLAITYWSFR LMIGFAAFSA
ALAAATMWLT RKGRITNKKW FARLGLIAIP TPFIASAFGW IFTEMGRQPW VVAPNPTGID
EIRMLTWGAV TTNQSAGVML FSLIAFTVIY TFLTAIWGML IWRYMAHGAP ETVHDESPEA
NPDRANDADA PLSFAY
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