| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1646 |
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| Symbol | |
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| ID | 8380815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1774698 |
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| End bp | 1776293 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645004397 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_003161597 |
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| Protein GI | 256832870 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.360042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00112571 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCACCC CCCACCTGTC ACCCAAAGCC CAAGCCGTCA TCAAGCAGAT CACCCAATTT
CGCGAACTTG ATGCCCCCAC CCATGGTGGA CGGGTCCTCA GCTACGTGTA CGACTCAGGG
CTTGCCGAAC TCGACGAACT AGCCGCACAA GCCGCCCGCG CCGTCCAATC CGTCAACGGC
CTCGACCCCA CCACATTCCC CTCCGTCGCC ATGATGGAAC GCGACGTACT CGGGTTCGTC
CGCGACGCAC TCAACGGTGA CAACAACGTC GTTGGGAACG TCACCAGCGG CGGAACCGAA
TCCTGCCTCC TTGCCGTCAA AACAGCCCGC GACCTGTGGC GGGCCACCCA TCAGGACACA
CCAGCCCACC AGCCCAACAA CACCGACCCT GCCACCCCCA GTGGCGCATC GGCACGCACA
ACACCACCGA CGGTGACCAT GCCACGCCTG GTGGCGCCAG CAACCGTCCA CGCCGCGTTC
CACAAAGCAG CCGCCTACTT CGACCTCGTC CTCGACCTCG TCGACGTGGA CCCCACCACC
GGTGCTGTCA ACCCAGCCGA TGTGATAGAC CGCCTCGCAG ACGACGTCGC CCTTGTCGTC
CTGTCCGCAC CAAACTACCC CTACGCCCAA CTCGACCCCA TCGCCGACGT CGCCACAGCA
ACCGAAGCAG CCAACATCCC ACTGCACGTG GACGCATGCA TCGGCGGACT GGCTCTACCC
TGGTGGCCAG GCCTCACCAC CCCCTGGGAC TTTCGTGTCC CAGGGGTCAC CTCCATCTCC
GCAGACCTCC ACAAATACGG GTACGCCCCC AAAGGGATCT CCGTGATCCT CCACCGCGGA
CCCCACCGCC ACCGCCACCA ATACTTCGCC GTCACCGCCT GGCCCGGCTA CCCCGTGGTC
AACCCCACCC TCCTTGGCTC AAAATCACCA GGACCCCTCG CCGCCGCCTG GGCCATCATC
ACCTACCTCG GCACCCAAGG ATTCACCGAC CTCACCGCCG CCACCCACCG CGCCACCACC
ACCCTCACCA CCGCCCTGAA CCGCATCGAA GGGCTCACCA TCCAAGGCAC CCCCACCGGG
CCACTGTTCG CCCTCGTCGA AGACACCACC GTCCCACCCA ACCGCCGTGT CAACCCCCAC
CTCCTGGTGG ACGCAGCCCG CACCCACGGA TGGATCCTCC AAGCCCAACC CGGCGCCCAC
CAACGCACCC AACCCGACCT CCCCCAATCA GCACACCTCA CCATCACACC CGTCACCGAA
CACCACACCC ACGACCTCAT CACCGCCCTC ACCACCGCAG CCGACACCGT CCGCGGCACC
CCAAGCCCCC TCACCGACCC AGACCTCCAC ACCCGCGTCA CCGCCCTCAT CGACACCCTC
ACCGAACCCA CCACCAACAC CACCCTCACC ACCGCACTCA CCGCCCTCGG CATCAACCCG
ACCACCGGTG ACCTGCCCAA CGACCTCTCC CACATCCTCG CCTACGCCCA ACTCCTCCCC
GCCCCCATCG CCGAACAACT CCTCACCGAA ATCCTCGCCC TCCTCGTCAC GCCCACCCAC
CGAAAGGAAC CTGACGAACC ACCCCACACC CACTAG
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| Protein sequence | MTTPHLSPKA QAVIKQITQF RELDAPTHGG RVLSYVYDSG LAELDELAAQ AARAVQSVNG
LDPTTFPSVA MMERDVLGFV RDALNGDNNV VGNVTSGGTE SCLLAVKTAR DLWRATHQDT
PAHQPNNTDP ATPSGASART TPPTVTMPRL VAPATVHAAF HKAAAYFDLV LDLVDVDPTT
GAVNPADVID RLADDVALVV LSAPNYPYAQ LDPIADVATA TEAANIPLHV DACIGGLALP
WWPGLTTPWD FRVPGVTSIS ADLHKYGYAP KGISVILHRG PHRHRHQYFA VTAWPGYPVV
NPTLLGSKSP GPLAAAWAII TYLGTQGFTD LTAATHRATT TLTTALNRIE GLTIQGTPTG
PLFALVEDTT VPPNRRVNPH LLVDAARTHG WILQAQPGAH QRTQPDLPQS AHLTITPVTE
HHTHDLITAL TTAADTVRGT PSPLTDPDLH TRVTALIDTL TEPTTNTTLT TALTALGINP
TTGDLPNDLS HILAYAQLLP APIAEQLLTE ILALLVTPTH RKEPDEPPHT H
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