| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1609 |
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| Symbol | |
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| ID | 8380778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1733075 |
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| End bp | 1733965 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645004359 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_003161560 |
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| Protein GI | 256832833 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.137378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGA AAACTGCTTC CCTTGCTGCC GTGTTGGCTG GTGGGCTTGT GCTTGCCTCC
TGCTCGTCTG ACGGCGGCGA CACCTCGCAA GGTGACGCTG GTGAGAACAA AGACTTGAGC
ATTGCTGTGT TCAACGGCTG GGATGAGGGC ATTGCGACCT CAGAGTTGTG GGCTGCTGTT
CTCGCTGATG AGGGTTACAA CGTGACCCTT GATTACGCGG ATGCTGCCCC TGTGTTTGTG
GGGTTGTCCA CGGGTGACTA TGACTTCACC ACTGATGTGT GGCTGCCTGG TACCCACAAA
GAGTACGTGG AAGAGTATGG TGACCAGATC GAGGATCTTG GTTCGTGGTT TGACCAGGCG
AAGCTCACTA TTGCTGTCAA CGAAGATGCT CCGATCACCT CGCTTGCCGA GCTTGCTGAC
AATGCAGACG CGTTCGGAAA CCAGATTGTT GGTATTGAGC CGGCTGCAGG GTTGACCTCT
GCGACCGAAA ACGAAGTCAT CCCGACCTAT GGTTTGGAAG GAATGGACTT CACGACCTCG
TCGACTGTGG CGATGCTCTC TGAGTTGAAG GCTGCTACGG ACGCGGGTGA GAATGTTGTG
GTGACGCTGT GGGAGCCGCA CTGGGCGTAC TCAGCGTTCC CAGTGCGTAA CCTTGAGGAC
CCCGAAGGCG CACTAGGCGG AGCTGAACTC ATCCACTCGT ATGGGCGTGA TGGTTTTGCC
GAGGACTTCC CGGAGGTGGC CCAATGGTTG GGTGACTTCT CCATGGACCC TGAACTGCTC
TATGACTTGG AAGATTTGCT CTTCAACGAG AACGACACTG ATGACTACGA GCCACTTGTG
CGCCAGTGGA TGGAAGAAAA CCAAGAGTTT GTTGACTCCA TGACTTCGTG A
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| Protein sequence | MMKKTASLAA VLAGGLVLAS CSSDGGDTSQ GDAGENKDLS IAVFNGWDEG IATSELWAAV
LADEGYNVTL DYADAAPVFV GLSTGDYDFT TDVWLPGTHK EYVEEYGDQI EDLGSWFDQA
KLTIAVNEDA PITSLAELAD NADAFGNQIV GIEPAAGLTS ATENEVIPTY GLEGMDFTTS
STVAMLSELK AATDAGENVV VTLWEPHWAY SAFPVRNLED PEGALGGAEL IHSYGRDGFA
EDFPEVAQWL GDFSMDPELL YDLEDLLFNE NDTDDYEPLV RQWMEENQEF VDSMTS
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