Gene Jden_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1587 
Symbol 
ID8380756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1709905 
End bp1711854 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content58% 
IMG OID645004337 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003161538 
Protein GI256832811 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA CACCGGTCGA ACTGTCCCCC TACGACCCAC TCCTACGCCC CATCACACTC 
GGGACAATGA CGATCCCGAA CCGAGTGGTT CTCCTACCCA TGGGCACAGA AATGGGCACA
CACGAAGGGC TCATCACCGA TCGAGAAATC GCCTACTACA CCGAACGCGC ACGCGGGGGA
GTAGGGCTCG TCATGACCGG TATTGCAGCG TTCTCCCAAG ACTTCGAACA GATCAACGAG
GGCCTGTGCC GCGTTGACAC GGATGCTGCA ATCCCTGGAC TCACCGCGCT CGCGGAGTCT
ATTCACGCAG CCGGCGCTAA GGTGTCATTA CAGCTCACCG CAGGCCTGGG GCGTAACATC
AACGTGGTCA ACCCTGACCG CCCCCCAATC TCCGCGTCAG ATAACCCGCA CTACGCCGAC
CCCAGCGTGT TGTGTCGGCC GCTGACGGTC GACGAGATCC AATTGCTCGT ACAGCGCGCA
GGCGAAGCCG CAGCGCGAGC TGCGCTTGCG GGCATTGACG CCATCGACAT TCACGGACAC
ACCGGTTACC TCATAGATCA GTTCATGTCC CCCGTGTGGA ACCGTCGCAC CGATGAGTAT
GGTGGGTCAG TTGAGGCGCG CTGCCGGTTT GCTGTGGAGA TTATCCAGGC TGTGAAGAAG
GCGGCGCCTG GGTTGCCTGT GAGCTTCCGG CTCTCTGTTG ATCACCGTTT CCCTGGTGGC
CGAACCGCGG AAGAGTCACG CAAAATCGCA GTGATTCTTG AGGCGGCTGG GCTGGACTTT
ATCCTTGCTG ATGACGGGTC GTACGAAGCA ATGGACTACG TTTTTCCCCC GTACTACCTG
GGTGACGGGT GCATGGTGTC AGCTGCTGAA GCCCTGAAAG AGGTTGTTTC CATTCCGGTT
GTGGCGTGTG GAAACCTTGA CCCAGACACT GCGGTGCAGG TGTTGAACGA GGGGAAAGCT
GATATTGCAG GTGTGGGGCG AGGCCTCATT GCTGACCCAG AATGGGTCAA CAAACTTGCC
CAGGGACGCC GGGAAGACAT CCGCCCGTGT ATTCGCTGTA ACGCCATGTG TGTGGGCAAT
GCCTTCTTTG CCCTGCCGCT AGGGTGCGCT GTGAACCCAC AGGTGGGCTT GGAACGCGAA
CGTGTCATTA CTCCCGCTCC TGTGTCAAAA CACGTGGTCG TTGTGGGTGG TGGTCCTGGT
GGACTAGAAG CGGCCAGGGT CGCGGGACTT CGAGGGCATC AGGTGGACTT GTATGAAAAG
AACGACCTCC TCGGTGGGGT TCTTCTTCCA GCAGCAACAC CAGAGTTCAA AAAGGAACTC
AAAGCCATGA TCAGTTGGTG GGAGAGGCAA CTCGCGCAGT TGCCCGTGAC GATCCACACG
GGAGTTGAGC TTCGGGCTGA TAGCCCAGAA ATTGCCGATG CGGATGAGGT GATTGTGGCA
ACGGGTTCCG TGCCCATTGA ACCTGCCAGC ATTGGTGGAC TTGATAGTGA CCAGGTGGTC
TCTGTCCTTG ACGCGCACAA TGGGGCACCG CTTGGCCACC GGGTTGTTGT TCTGGGTGGT
GGCTTGTCAG GCGCAGATTT GGCACTAGAG CTTGCTCTTG AGGGACACGA GGTCACCATT
GTGGAAATGG GCGAGGGGCT TGCCCGTGAT CTCATTATCA TCAACCGGAT GACGCTTCTG
CGGCAGCTTG CCGACCACAA TGTCACTGTG TTGACCAACC ACACTGTCAC GCAGGTGACG
TCGGGTGCGG TTGTGGCAAC ACACGACGGC CAGGATGTTG TCATTGACGC AGACACTGTG
ATTTCCGCGT TTGGTGTAGC ACCAAACAAA GAATTCCAGG AAGCTGCGCA AGCTCAAGGC
CGGACGATTG TCGCCGTTGG TGACTGCGTC ACGCCCGCGA AAGTGGGTGA AGCGATCAAC
GCAGGCTTTG CAGCGGCCTG CGAACTCTAG
 
Protein sequence
MTSTPVELSP YDPLLRPITL GTMTIPNRVV LLPMGTEMGT HEGLITDREI AYYTERARGG 
VGLVMTGIAA FSQDFEQINE GLCRVDTDAA IPGLTALAES IHAAGAKVSL QLTAGLGRNI
NVVNPDRPPI SASDNPHYAD PSVLCRPLTV DEIQLLVQRA GEAAARAALA GIDAIDIHGH
TGYLIDQFMS PVWNRRTDEY GGSVEARCRF AVEIIQAVKK AAPGLPVSFR LSVDHRFPGG
RTAEESRKIA VILEAAGLDF ILADDGSYEA MDYVFPPYYL GDGCMVSAAE ALKEVVSIPV
VACGNLDPDT AVQVLNEGKA DIAGVGRGLI ADPEWVNKLA QGRREDIRPC IRCNAMCVGN
AFFALPLGCA VNPQVGLERE RVITPAPVSK HVVVVGGGPG GLEAARVAGL RGHQVDLYEK
NDLLGGVLLP AATPEFKKEL KAMISWWERQ LAQLPVTIHT GVELRADSPE IADADEVIVA
TGSVPIEPAS IGGLDSDQVV SVLDAHNGAP LGHRVVVLGG GLSGADLALE LALEGHEVTI
VEMGEGLARD LIIINRMTLL RQLADHNVTV LTNHTVTQVT SGAVVATHDG QDVVIDADTV
ISAFGVAPNK EFQEAAQAQG RTIVAVGDCV TPAKVGEAIN AGFAAACEL