| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1584 |
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| Symbol | |
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| ID | 8380753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1705993 |
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| End bp | 1707891 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645004334 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_003161535 |
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| Protein GI | 256832808 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.512555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGAAC ACACAACACA CACGTCAACT CGCCTGGAAG ACTATGCACT TCTTTCTGAT
ATGAAAACTG GTCCACTGGT GTCGAGGGAG GGGTCCATTG ATTGGTTGTG TCTGCCTCGG
TTTGATTCTC CTGCTGTGTT CTCTGCGCTG CTTGGTGAAC CTGAGGATGG CCGTTGGGAG
CTTCGTGTGG TGGATGGGCG GGTGGTGGAT CGTCACTATG AACGGGACAC GTTTGTGTTG
CACACCACGT GGGAGACCGC GGAGGGGCGC GTTGTGGTGA CTGATGTTCT TCCTACTGAC
ACGGCGACGA ACTCTGTGGT TCGTCGGGTG CGGTGTGAGC GGGGGCGGGC AACGATTGCT
CATGATCTTC GTATCCGGTT CGATTACAAC CGTGCGCGTC CGTGGACTCG CACGGTGTCG
TGCCCTGATG GCAGTGAGGC GTTGTTGTCT GTTGCTGGAC CAGACGCGTT GTTGTTGAGT
GGGCCGCCGA TGCGCATCGA TGATTCGTGG GATACGCACA GTGACTACCC GGGTGCGGTA
GGGGACGAGG AGGACGGTCC TGCTGACCGG CTCGTCGATT TTCATGGTGC GATCGCTGAC
CGTCTTGCGC TCACGATGAC ACTTGATGAA GGTGATGAGG AGGCGTGGAC GTTGACGTAC
CTTCCCTCCC ATTATGATTT GCCGGCTGTG CCAGACCCTC ATCAAGCGAT CGCAGACACG
GTGGAGTTTT GGCGCCAATG GGCTGGCCAC GTGGATGCAC GCCACGAGTA TGACGAACGG
GTGATGCGGT CATTGCTGGT GCTTCGGGCA CTGACTGACC AGGAAACGGG TGGCATTGTG
GCGGCGCCAA CCACCTCACT TCCCGAGGAA TTTGGGGGAT CTCGCAACTG GGATTACCGG
TACACGTGGC TGCGGGATGC GGCACTGACC ATTGAGGTGT TGATTGCCCA CCAGTACACC
AAAGGCGCAT TGCACTGGCG TAATTGGTTG TTGCGGGCTG TTGCTGGGGA CCCTGATGAC
ACGCAGATCA TGTATGGCAC TGCGGGGGAG CGGCACTTGC CGGAGCGGGA ACTTGACCAT
TTGGCTGGTT ATGAAGGGTC GCGGCCGGTG CGCATTGGTA ATGGTGCTGT GGACCAGTAC
CAGGCTGATG TGGTGGGGGA GGTCATGATC GCGTTAGCGG CGCTTCGTGA GGCTGGTGTG
GAAGAAGATG AGTTCTCCTG GACGCTGCAA CGTAACCTGT TGACCTTTGT GGAACACAAC
CTTGATCGGC CAGACCACGG CATTTGGGAG ATGCGTGGCC CCAAAGACTG GTTTACGCAT
GGTCGTGCCA TGATGTTTGC CGCGTTTGAT CAGGGTGTTA AAGCTGTTGA TCAGTATGGT
TTGCCTGGAC CGGTTGACCA ATGGCGGATG CGCCGCGACC AATTACGAGA CGAGGTGTTG
TCACGAGGCT TCAATGAGGA GTTGGGGTCA TTTACGCAGA CCTACCATAA CGACGAAGTG
GATGCGTCGT TGTTGCACCT TCCTGTCACC GGGATCGTGG CCCCTGATGA CGAACGGATG
CTGGGGACGG TGAGAAAAAT CGAACACGAC CTGCTTGACG AGGCGGGTTT TGTCCACCGA
TACCGAACGG ATCTGGGCAT AGATGGGTTG GAAGGTGGCG AGTATTCCTT CATGATCTGC
TCGTTTTGGT TAGTGGAACA ATACGCACGC AGCGGACGGA TCGGCGACGC CGAAGACCTT
GTGGAGCGTC TCAGCAGGTG CGCCAACGAC TTGGGATTGT TCAGTGAAGA ATACGACTCA
TCCAGTCAAC GGCTCGCAGG TAACTACCCT CAAGCGTTCA GCCACATCGG CTTTATTCGG
GCCGTCGATG CGATTGCCCG CGCCAGAGGA ACACGGTAA
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| Protein sequence | MGEHTTHTST RLEDYALLSD MKTGPLVSRE GSIDWLCLPR FDSPAVFSAL LGEPEDGRWE
LRVVDGRVVD RHYERDTFVL HTTWETAEGR VVVTDVLPTD TATNSVVRRV RCERGRATIA
HDLRIRFDYN RARPWTRTVS CPDGSEALLS VAGPDALLLS GPPMRIDDSW DTHSDYPGAV
GDEEDGPADR LVDFHGAIAD RLALTMTLDE GDEEAWTLTY LPSHYDLPAV PDPHQAIADT
VEFWRQWAGH VDARHEYDER VMRSLLVLRA LTDQETGGIV AAPTTSLPEE FGGSRNWDYR
YTWLRDAALT IEVLIAHQYT KGALHWRNWL LRAVAGDPDD TQIMYGTAGE RHLPERELDH
LAGYEGSRPV RIGNGAVDQY QADVVGEVMI ALAALREAGV EEDEFSWTLQ RNLLTFVEHN
LDRPDHGIWE MRGPKDWFTH GRAMMFAAFD QGVKAVDQYG LPGPVDQWRM RRDQLRDEVL
SRGFNEELGS FTQTYHNDEV DASLLHLPVT GIVAPDDERM LGTVRKIEHD LLDEAGFVHR
YRTDLGIDGL EGGEYSFMIC SFWLVEQYAR SGRIGDAEDL VERLSRCAND LGLFSEEYDS
SSQRLAGNYP QAFSHIGFIR AVDAIARARG TR
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