Gene Jden_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1583 
Symbol 
ID8380752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1705152 
End bp1705979 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content62% 
IMG OID645004333 
Productmembrane-bound lytic murein transglycosylase B-like protein 
Protein accessionYP_003161534 
Protein GI256832807 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTTCTG GTTCACGTGG CGGGTCGCGG CGTGTGTCGC GTCGCACCCA GCGTCGTCGG 
CTGGGTTGGG GTGTGGTGGT GACGTGCGCT GTTGTGGGCG TGGTTGTCGC GGGGTTGGTG
GGTGCGATTC GGCATTTTGC CGCCGGGCAG CGTGTCGTTG AGGCTCCAGT TCCCTCGGTT
TCGCCTCTTC CTGTTGCGTT GCCTGTGCGT TCTGGTTCTC CTGATACGGA GGGGACCGCA
TCGTTGCCTG ACGATGCGTG GGTGGAGTTC GCGGCGAGTG CTACTGGGGT GAGTGCTCGC
GCTGTGCGCG CGTATGCGGG TGCGGCGTTG TTCATGGCTA AGGACAACCC TGAGTGCGCT
ATTCCGTGGA CTTTGCTGGC GGGTGTGGGA CGGGTGGAGT CTTTTCATGG GCAGATCAAT
GGGAGTGAGG TGCGCGCTGA TGGCCTTGTG ACGCCGCAGG TGATTGGTAT CGCGTTGGAT
GGGAACGGGG TTGCTGCGAT TCGTGATAGT GACGGCGGTG CCTTAGATGG TGATGTGGTG
TGGGATCGGG CGGTTGGGCC CATGCAGTTC ATTCCGCAAA CGTGGGAACA GTTTGGGGTT
GATGCCACGG GCTCTGGTGG CGCTGACCCC CATCACATCG ATGACGCGGC GCTGACAGCG
GCACAGTATT TGTGTGACCG TGCCGGTGGC CCTGTGGTGG AGGAGGACCG GTGGCGGCAG
GCGATTTTGG CGTACAACAA CTCCGTGCAG TATGTGCGCG ATGTGACAAC GTTTGCGAAT
AGGTATGCGC TGGCGGTGGG GCAGGCAACC ACGCTCGATC AAGGCTAG
 
Protein sequence
MGSGSRGGSR RVSRRTQRRR LGWGVVVTCA VVGVVVAGLV GAIRHFAAGQ RVVEAPVPSV 
SPLPVALPVR SGSPDTEGTA SLPDDAWVEF AASATGVSAR AVRAYAGAAL FMAKDNPECA
IPWTLLAGVG RVESFHGQIN GSEVRADGLV TPQVIGIALD GNGVAAIRDS DGGALDGDVV
WDRAVGPMQF IPQTWEQFGV DATGSGGADP HHIDDAALTA AQYLCDRAGG PVVEEDRWRQ
AILAYNNSVQ YVRDVTTFAN RYALAVGQAT TLDQG