| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1576 |
|---|
| Symbol | |
|---|
| ID | 8380745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1700009 |
|---|
| End bp | 1700812 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645004326 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003161527 |
|---|
| Protein GI | 256832800 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTTA TCGAGCTTCC TGTTTCCGCA AACACTCGGT GCACCCCGTC CACATCACTG
GACCACCCCC TGGGATGCCG CCATGGACAA GTCCCACACC TTGCACCAAG CACTACACGC
ACACTGTCCA CGCACATGCT CGCCTGGGTT CCCCACGGAA CGTTACGCGT TGACATCGCG
GGTCGGACCT ACCTTGTCAC CCACACCCGC CTCCTGTGGG TCCCTGCCAA CGTGACACAC
ACGCTACGCC CGTCCCACGA TGCCCTCCTT ATCCCTTTCA TGATGCCCAC TGATCCAGAC
ACCACCATCA GCACGTGGAC AACGGTGCAC ACGATCCGCG CCACAGGCGC ACTGCATTCG
CTTATCCGCG TGCTAGCCCA ACCTGCGTTA TCGACCGCCC ACGAGTACTC CCGAGCGCTC
GATCAGTTAC TGGATGTTCT GCCTCGGCTC AAAGAACTCG ACATTGACGT GGCCCTCCCG
TGCGATCCGC GTGCGGCCAC TGTCGCCACA GCGCTGATAG AGAACCCTGC GCATCCACGA
AGCCTCGAGG AATGGGCAAA GGTTTGTTAC ACGTCGGCAA AAACACTACA GCGCCTGTTT
GTGCAGCAAA CAGGCGTCAC TTTCCCCGAG TGGCGCACTC GGGTGCGAGT GCGAACCGCT
TTGGATTTAC TCCATGAAGG CTGGACAGTT CATTCTGTGG CGACACGGGT GGGCTATTCG
ACTGCCAGTG GATTTATCGC CGCATTTTCC CGAATTACCG GCCACACACC AGCCCGTTAC
ATGCGAGAAA ACCCGAAAAT CTAA
|
|---|
| Protein sequence | MTVIELPVSA NTRCTPSTSL DHPLGCRHGQ VPHLAPSTTR TLSTHMLAWV PHGTLRVDIA
GRTYLVTHTR LLWVPANVTH TLRPSHDALL IPFMMPTDPD TTISTWTTVH TIRATGALHS
LIRVLAQPAL STAHEYSRAL DQLLDVLPRL KELDIDVALP CDPRAATVAT ALIENPAHPR
SLEEWAKVCY TSAKTLQRLF VQQTGVTFPE WRTRVRVRTA LDLLHEGWTV HSVATRVGYS
TASGFIAAFS RITGHTPARY MRENPKI
|
|---|
| |