Gene Jden_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1570 
Symbol 
ID8380739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1693106 
End bp1693795 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content61% 
IMG OID645004320 
Productiron (metal) dependent repressor, DtxR family 
Protein accessionYP_003161521 
Protein GI256832794 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.567097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG GGACGCTGAC ATCAGTCGCA CAGGACTACA TCAAAGTGGT GTGGGGCCTG 
CAGGAATGGT CTGACGCGCC AGTCACCACA AAAGACCTCG CCGAACGGCT TGGCGTTGGC
CCATCCACGG TCTCCGAAAC GGTGCGGCGT TTGGTCAGCC AGGGCCTTCT CGACCATGAA
CGCTACGGGG CCATCCACCT CACTGAGCAA GGCAGGCGCC ACGCACTCGA CATGGTTCGC
CGGCACCGTC TCATTGAAAC GTTCCTTGTC CAACACTTGG GATACACCTG GGACGAGGTC
CACGACGAAG CCGAAGTACT CGAACATGCA GTCTCTGACC TCATGGTGCA CCGCATCGAC
GAAGCTCTTG GCCATCCCAC CCGTGACCCG CACGGCGACC CCATCCCCAG TGCAAACCTG
GCTCTGACCC AACCTGCCGC GTTGACACTC ACGGTCCTGC CCGAGGGGGC GACCGGAACC
GTGGCACGAA TCTCAGATGA CGACCCCGAT GTGTTACGGT ACTTCGCTGA TCTTGGGTTC
GGGCTTGACG CACACGTTCG TGTCCACGCC CGCCGTGACG CTATTGGGGT CATCGATGTC
CTGTGGGCAC CAACAAACAA CCCCAACCAC CTGACCGAAC TCACCTTAGG TTTGCGCGCA
GCAGACGCCG TATGGATAGA GACTGAGTGA
 
Protein sequence
MSTGTLTSVA QDYIKVVWGL QEWSDAPVTT KDLAERLGVG PSTVSETVRR LVSQGLLDHE 
RYGAIHLTEQ GRRHALDMVR RHRLIETFLV QHLGYTWDEV HDEAEVLEHA VSDLMVHRID
EALGHPTRDP HGDPIPSANL ALTQPAALTL TVLPEGATGT VARISDDDPD VLRYFADLGF
GLDAHVRVHA RRDAIGVIDV LWAPTNNPNH LTELTLGLRA ADAVWIETE