| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1562 |
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| Symbol | |
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| ID | 8380731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1679921 |
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| End bp | 1680706 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645004312 |
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| Product | Helix-hairpin-helix DNA-binding class 1 |
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| Protein accession | YP_003161513 |
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| Protein GI | 256832786 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAACCCGC ACGACGAATC TCAACCCCGA GCCTCCTCAT CACGCCTTCT TGACACCTAC
ACTGCAGCCC ACGGGCACCC ACTCAACCAT GACGGGTTGG TGTCTCGTCA ACGCACCATT
CAGCGGTGGA CGTGGGGTAC GACTGCCGCA ACAGTAGCGC TCATGTGTGC ACTCGTTGTG
TTCCTCGTGA TCACCATCTC CTCGTACACC ACACCACAAC CCATCCTTGA CTCAAGTGCC
CCTACAGCTG TCAATGAACC CGCTGACATC GAGCCCGCCA GTGACCCAGC TGACCAGGAG
CCGCACACTG TTGAGGACAC CACCGGCAAC ACCCCTGCCC CCACCAGTGG CCCGGTGGTC
CATGTTGCCG GGGAAGTAGA ACAACCGGGG ATATACACGC TAACCGATGG TGCTCGAGTG
GCAGATGCCC TCAACGCCGC TGGCGGTCTC ACCACCGATG CTCACCCCGA TGCCCATAAC
CTTGCCCGTC TCGTTCAGGA CGGGGAACAA ATCCTTGTCC CTCACAAAGA CGACGACCCA
CCTGTCAACG TTCCGTCCCC AACCCCATCA ACCGCACCAG AGACTGGCCC TATCAACATC
AACACCGCCA CCAGTGAGGA CCTCCAAACG CTCCCCGGTA TTGGGCCTGC GCTGGCGCAA
CGCATCATTG ATGACCGCAC CACACACGGG CCGTTTCCCA CGGTGCACTC ACTGGACCGA
GTCCGCGGGA TCGGACCAAC GATCCTGGAG AACCTCACCC CTCACCTCAC CACGGGGGCT
TCGTGA
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| Protein sequence | MNPHDESQPR ASSSRLLDTY TAAHGHPLNH DGLVSRQRTI QRWTWGTTAA TVALMCALVV
FLVITISSYT TPQPILDSSA PTAVNEPADI EPASDPADQE PHTVEDTTGN TPAPTSGPVV
HVAGEVEQPG IYTLTDGARV ADALNAAGGL TTDAHPDAHN LARLVQDGEQ ILVPHKDDDP
PVNVPSPTPS TAPETGPINI NTATSEDLQT LPGIGPALAQ RIIDDRTTHG PFPTVHSLDR
VRGIGPTILE NLTPHLTTGA S
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