| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1548 |
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| Symbol | |
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| ID | 8380717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1664785 |
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| End bp | 1665558 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645004298 |
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| Product | protein of unknown function DUF558 |
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| Protein accession | YP_003161499 |
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| Protein GI | 256832772 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCGC CTGTTTTCCT TGCTGAGTCA ACTGATCTCG CCGCCTACCG TGAGGGGGAC
ACATACTACC TTGATGGGGT GGAAGGTCGC CACGCAGGAG TTGTTCAACG ACGTTCCGTG
GGGGAGGCCA TCGACATCGT TGACGGTCAC GGGACGCGTT TGAGCTGCAC AATTACTCAC
GTCTCGGGTG AACACCTTGA TCTCTTGGTC ACGTCGGTCT CCCACGAGTC ATGTGGACAA
TACCGGTTGA CTCTCGTGCA AGCGCTCGCC AAAGGCGATC GTGACGAGTT GGCCATTGAA
GCAGCGACTG AGGTTGGCGT GGATCGAGTG ATTCCGTGGC AGGCTGATCG GTCCATTGTG
GTCTGGCGTG GGGCGCGGGC GGCAAAGTCT CATGCACGAT GGGTGGCGAC AGTTCGCTCA
GCAATGAAAC AGGCGCGGCG AGCGCGGCTG CCTATGGTTG AGCAGCCGGT GACATCGCAA
CAATTGGTTG ATGTCATTGC GGAGACAACG CAGACGGGCG GGGTCGTGTA TGTTCTTCAC
GAAAGCGCGA CAACGGCGTT GACCAGCCAG CCACGACCAC CAGGTGGCGA GGAGTTAGCC
CCAGTCGATG TTGTTGTCGT GGTGGGACCT GAAGGGGGCA TCAGTGACAG CGAACTCGAA
AAGTTCACTG CCGCTGGCGC ACAGGCAGTG CTCCTTGGGC CGCACGTGTT GCGCACCTCC
ACTGCTGGCC CAGTTGCCTT GGCGTTGTTG TCTGCCTCAA CTGGCCGATG GTGA
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| Protein sequence | MSAPVFLAES TDLAAYREGD TYYLDGVEGR HAGVVQRRSV GEAIDIVDGH GTRLSCTITH
VSGEHLDLLV TSVSHESCGQ YRLTLVQALA KGDRDELAIE AATEVGVDRV IPWQADRSIV
VWRGARAAKS HARWVATVRS AMKQARRARL PMVEQPVTSQ QLVDVIAETT QTGGVVYVLH
ESATTALTSQ PRPPGGEELA PVDVVVVVGP EGGISDSELE KFTAAGAQAV LLGPHVLRTS
TAGPVALALL SASTGRW
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