Gene Jden_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1543 
Symbol 
ID8380712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1660456 
End bp1661400 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content54% 
IMG OID645004293 
ProductGTP-binding protein Era 
Protein accessionYP_003161494 
Protein GI256832767 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAT TCCATCTCAC GCCCCTTCCA GAACTGCCCG AGGGGCACCG CTCTGGTTTC 
GCGTGTCTTG TTGGCCGACC TAACGCCGGA AAATCTACCT TAACGAATGC GCTGGTTGGC
CAAAAGATCG CTATTACAGC CAACAAACCG CAAACAACAC GCCACACAAT CCGTGGAATC
GTCAATCGCG AGGATGCACA ACTCATTCTC GTGGACACAC CAGGCTTGCA CCGCCCTCGT
ACTTTGCTCG GGGAGCGCCT CAATGACCTT GTTCTGTCCA CCTTGTCTGA AGTTGATGTG
GTTGTGTTCT GCCTGCCTGC GGACCAAAAA ATTGGTCCGG GCGACAGATT CATTGCCGAA
CAGCTCGCTC GCCTCAATGA ACGCCGCACC AAAACCCCCA TCATTGCTGC AGTCACAAAA
GCTGATGTCG TATCCCGTGA CGCACTGGCA TCGCACTTGC TGGAGGTGGC AGAACTCGCT
GATTTCTCGG ACATTATTCC GGTCTCGGCT GTGGAGGGTT TCCAAGTTGA GGCACTCACG
GATCTTTTGG TGTCACATCT GCCTGAAGGC GTGAAGTTCT ACCTTGATGG AGAACTGACC
GATGAACCTG AGTCAGTGAT GATTGCAGAA CTCATCCGAG AAGCAGCAAT TGAAGGGGTC
CGCGATGAAC TCCCGCACTC GCTGGCTGTT GTCGTGGACG AAATTATTGA AAAGGACAAA
CAGGGCCGCC CTCACCTGAC TGTTCACGCA TCAATATTTG TTGAACGTGA CTCGCAAAAG
GGCATCATCA TCGGGAAACA AGGCTCCCGG TTGCGTAAGG TGGGGAGTCA AGCCCGTGTG
GGAATCGAGG CGCTCTTGGG AGCACATGTG TATCTTGATT TACGAGTCAA GGTTGCAAAG
GACTGGCAGC GAGACCCCAA ACTCCTCAAC CGGCTCGGAT TCTGA
 
Protein sequence
MTEFHLTPLP ELPEGHRSGF ACLVGRPNAG KSTLTNALVG QKIAITANKP QTTRHTIRGI 
VNREDAQLIL VDTPGLHRPR TLLGERLNDL VLSTLSEVDV VVFCLPADQK IGPGDRFIAE
QLARLNERRT KTPIIAAVTK ADVVSRDALA SHLLEVAELA DFSDIIPVSA VEGFQVEALT
DLLVSHLPEG VKFYLDGELT DEPESVMIAE LIREAAIEGV RDELPHSLAV VVDEIIEKDK
QGRPHLTVHA SIFVERDSQK GIIIGKQGSR LRKVGSQARV GIEALLGAHV YLDLRVKVAK
DWQRDPKLLN RLGF