Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1527 |
Symbol | |
ID | 8380696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1641600 |
End bp | 1642838 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645004277 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003161478 |
Protein GI | 256832751 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.207567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGAG GCATCCCAGC AACAGCTGCA GCACTCGGTA TGGCACTTGT TCTCGCGTCC TGCTCCGGCG GTTCCGACAA CAACGACAAC GAGCCCACCG CGAGCGAATC AACGGGCGTT GCCGGCAGCA TGACAATCTG GGTCGACGAA ACTCGAATCA ACGACTTTGA ATCCGTCATC CAGAAGTTCG CTGATGAGCG AGGTGTCGAC GTTCAGGTTG TGCAAAAGGC ATCCGGTGAC ATCCGCACCG AATTCGTCCA ACAAGTTCCC ACTGGTGAAG GCCCAGACGT CATCATCGGT GCGCACGACT GGCTCGGCGA GTTCGTGTCC AACGGTGTTG TCGCCCCAGT TGAACTGGGT GACAAGGCTG CTGGCTTCGC CGAAGCAGCA ACCAAAGCGT TCGCCTACGA AGGCACAAAC TACGGTGTCC CGTACGCAAT TGAATCCATT GCCCTGGTCC GCAACGACGA ACTTGCCACC GAAACCCCTG CCACGTTCGA CGAACTGATC GAACAAGGCA AGGAACTGGA CGCCAAGTAC CCCGTTCTCT TGCAGCAGGG TGCTGAAGGC GACGCCTACC ACATGTACCC ACTGCAGACA TCCTTCGGTG CACCCGTGTT CACCTCCGAG GACGACGGTT CTTACACGAC GGAACTCGGT ATGGGCGGCG AAGCTGGACA CAACTTCGCT GAGTACCTGA AGAAGCTTGG TGGCGAGGGA ATCCTCGACT CCAACATCGG TGGAGACCAG GCAAAAGAAG CCTTCATAAA GGGAGAGTCC CCTTACATCA TCACCGGCCC TTGGTACGCC AATGAATTTG CTGCTGAAGG CATGACGATC TCGGTCCACG AGGTTCCGTC TGCTGGTGGA GAACCTGCAC AACCATTTGT CGGAGTGCAA GGCGCGTACA TCTCTGCTAA GGCAAACAAC CCTGTTCTTG CCCAGGACTT CGTGGTGAAC TACCTCTCCA CTGAAGAAGC AGCAGATGAA ATCCACGCAG CAGGTGGGCG AGTGCCAGCC TTGACTGCAT CAGCTGACAA AATGACGGAC GAGCTTGCGA AATCCTTTGG TGAAGTGGCC GCAGCGGGTG CTCCTATGCC ATCCATCCCA GAAATGGGAT CTGTGTGGGC TTACTGGGGT GCGACCCAGG TGGCGATCTT CACCGGTCAA GAAAAGGACC CCGTAGCTGC ATGGGACCGC ATGCTGGAAA ACATCAACAG TGAGATCGCC GGAGGCTAA
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Protein sequence | MQRGIPATAA ALGMALVLAS CSGGSDNNDN EPTASESTGV AGSMTIWVDE TRINDFESVI QKFADERGVD VQVVQKASGD IRTEFVQQVP TGEGPDVIIG AHDWLGEFVS NGVVAPVELG DKAAGFAEAA TKAFAYEGTN YGVPYAIESI ALVRNDELAT ETPATFDELI EQGKELDAKY PVLLQQGAEG DAYHMYPLQT SFGAPVFTSE DDGSYTTELG MGGEAGHNFA EYLKKLGGEG ILDSNIGGDQ AKEAFIKGES PYIITGPWYA NEFAAEGMTI SVHEVPSAGG EPAQPFVGVQ GAYISAKANN PVLAQDFVVN YLSTEEAADE IHAAGGRVPA LTASADKMTD ELAKSFGEVA AAGAPMPSIP EMGSVWAYWG ATQVAIFTGQ EKDPVAAWDR MLENINSEIA GG
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