Gene Jden_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1526 
Symbol 
ID8380695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1639827 
End bp1641431 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content55% 
IMG OID645004276 
ProductFructose-bisphosphate aldolase 
Protein accessionYP_003161477 
Protein GI256832750 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.24006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.935201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATCG GGCAGCAGGC GGCCACACCG CCGCACTCGA GGAAACGGTC GGGGGCAGGC 
ATTCAGGATG CCTCTCCGGC ACGGAACTTC ACTGCGGGCT TCTTCGCGAA GCTCGCTATC
ATGGCCGTTA TCAACGCCTT TGGCTTGTAC GGGCTCTACG CTTCGTGGGC GGTTGGCGCA
TGGGGTGTTT TCACTGGCCT CGCTATCGCC GTTATCGTTG CCAACTGGGT GTACTTTTCG
CGCCGCGCAA TTCCCGGCAA ATACCTGTAC CCGGGGCTTC TCTTCCTGTT CACTTACCAA
CTGTTCACCA TGGTGTACAC CGGGTATGTG GCCTTTACGA ACTACGGCGA CGGCCACAAC
TCCACCAAAG CAGATGCGAT CTCCTCGATC CTTTCGTACA ACGAAAAACG AGTCGAAGGA
ACTGCTGGTT ACCCCATCAC TGTCCTTGAA GATGCAGATG GCAACATCGC TTTCGGGATC
GTTGATGATG GACAGTCCAA AGTTGGTGCC AACGACACCG CTCTTGAGAA CATCGATGCG
CCCAACGACG GTGCCCGCAT TACTGACATC GACGGCTACA CGATCCTCGA CTTCGCACAA
ATTGCTGCCA ACCAGGATGA GGTAGTGAAC CTCCGCGTTC CTATTTCCGA TGACCCCAAT
GACGGGTCCC TGCGCACCAC CGATGCGACC AACGCCTACG TGTACCGGTC CGTTTTGGAG
TATGACGAGT CTCGCGATGT CATGACGAAC GTCGAGACGG GCGTCGAGTA CACCCCAAGC
GACCGAGGGA ACTTTGTCTC CGCTGATGGG GAAGAACTCA GCCCTGGATG GCGCGTCTTT
GTGGGGGGCG AGAACTTCAC CAAGATGTTC ACTGACTCCC GGTTGTCTGG CCCCTTCTTC
CAAATCCTTG TGTGGACGTT CGTCTTTGCT TTCTTATCTG TTGCCACAAC ATTTGCCTTG
GGGTTGGCAC TTGCACTGGT CTTTAACGAC CCTCGTGTGC GAGGCCGAAA GTTCTACCGT
TCGCTGCTGA TCCTGCCCTA TGCGTTCCCT GGGTTCCTCT CAGCGCTGGT GTGGCGAGGG
ATGCTCAACG AACGTTTTGG TTTCATCAAC GAGGTCATTT TGCAAGGTAG TTCAGTACCT
TGGTTGACTG ACCCGTGGCT TGCAAAGTTC TCCATTATCA TGGTGAACCT TTGGCTCGGA
TTCCCATACA TGTTCCTGAT CTGTACTGGG ACATTGCAAT CCATCCCTTC CGATGTCCTG
GAATCGGCGC GCGTTGATGG TGCGTCCCCT TGGCGTGTGC TGCGGTCCAT TATTTTGCCG
TTGCTCATGG TCTCCACGGC TCCATTGCTG ATCTCGAGCT TTGCGTTTAA CTTCAATAAC
TTCGCACTGA TCTACATGCT GACCGGTGGT GGCCCCAACT TCACCGGAAG CCCACTGCTC
ATCGGGTCCA CAGATATTTT GATCTCGATG GTGTACTCGG TTGCGTTCGA ATCAGGGGTG
AAGCAGTACG GGTTGGCGTC TGCTGTGTCC ATCCTGATCT TCATCTTCGT TGGAATCATC
TCGTGGCTTG GCTTCCGTAA GACCAAGCAG TTGGAGGAGA TCTGA
 
Protein sequence
MSIGQQAATP PHSRKRSGAG IQDASPARNF TAGFFAKLAI MAVINAFGLY GLYASWAVGA 
WGVFTGLAIA VIVANWVYFS RRAIPGKYLY PGLLFLFTYQ LFTMVYTGYV AFTNYGDGHN
STKADAISSI LSYNEKRVEG TAGYPITVLE DADGNIAFGI VDDGQSKVGA NDTALENIDA
PNDGARITDI DGYTILDFAQ IAANQDEVVN LRVPISDDPN DGSLRTTDAT NAYVYRSVLE
YDESRDVMTN VETGVEYTPS DRGNFVSADG EELSPGWRVF VGGENFTKMF TDSRLSGPFF
QILVWTFVFA FLSVATTFAL GLALALVFND PRVRGRKFYR SLLILPYAFP GFLSALVWRG
MLNERFGFIN EVILQGSSVP WLTDPWLAKF SIIMVNLWLG FPYMFLICTG TLQSIPSDVL
ESARVDGASP WRVLRSIILP LLMVSTAPLL ISSFAFNFNN FALIYMLTGG GPNFTGSPLL
IGSTDILISM VYSVAFESGV KQYGLASAVS ILIFIFVGII SWLGFRKTKQ LEEI