| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1507 |
|---|
| Symbol | |
|---|
| ID | 8380676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1618884 |
|---|
| End bp | 1619495 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645004254 |
|---|
| Product | protein of unknown function DUF1349 |
|---|
| Protein accession | YP_003161458 |
|---|
| Protein GI | 256832731 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3506] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.449634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.257305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCAGA TCTCATATCC CGACAACACG ATCGAACACC TGGATTGGTC GGCGGGGGCG
TGGACACACG GACCAGCGGC CACACGTGTG TCACCTGACG GGGTTTTGTT CGCGGAAGCG
GTGGAGGGCA GTGACGCGTG GCGGCACACC TCCTACGGGT TCGTGCACGC CACAGAACAC
GCACTCGTTG CACCGTTTGC CCCAGGCACT GCGATGGAGG TGGAGTGTGG TACACCGTTC
ACCCAGCAGT TTGACCAGGC AGGGATCTTC GTCAAGGTGT CCGAGGAACA GTGGGTAAAG
GCGGGGATCG AGTTCGCTGA CGGGGTACCC CAGATCGGCG CGGTGGTGAC CAACGGGAAG
TCGGACTGGT CTGCGTCACC CGCACCCCAG TGGGGGTCAA CTCGCGTGAC ATTCCGGGTG
AGCTGGACCA ATAATGCACT CACAATCCGG GCACGCCGTG AGGGCACCAA CTGGCAGTTA
GTGCGCGTCC TCCCGTTCGA CGCACGCGAC CATGTGACCG CAGGCCCGTT CCTGTGTGCA
CCTACCCGAG CCGGACTTGA AGTGCCGTTC TACAAGTGGC GGATAACCCC ACCAGACGAG
TCATTGCACT AA
|
|---|
| Protein sequence | MTQISYPDNT IEHLDWSAGA WTHGPAATRV SPDGVLFAEA VEGSDAWRHT SYGFVHATEH
ALVAPFAPGT AMEVECGTPF TQQFDQAGIF VKVSEEQWVK AGIEFADGVP QIGAVVTNGK
SDWSASPAPQ WGSTRVTFRV SWTNNALTIR ARREGTNWQL VRVLPFDARD HVTAGPFLCA
PTRAGLEVPF YKWRITPPDE SLH
|
|---|
| |