Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1500 |
Symbol | |
ID | 8380670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1609830 |
End bp | 1611026 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645004248 |
Product | restriction modification system DNA specificity domain protein |
Protein accession | YP_003161452 |
Protein GI | 256832725 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.100633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCACA TCGACGAACT GGTAGCACAG TACTGCCCAG TAGGAGTCGA GCTTCGCGAG ATTGGCGACG TGATCACTGC GCTCCGTACG GGACTGAACC CGCGCACGAA CTTCAAACTG AACACTCCCG GATCAGCCAA TTTCTACGTG ACCGTCCGTG AGCTAGGCGG CTTCGTGATC CGCTGTTCGG ACAAGACTGA CCGCGTGGAT GACGCTGGTC TCGAGGTAAT CCAACGGCGT TCCAAGTTGC AGGCGGGCGA TGTGCTGTTC TCTGGCACAG GAACGATCGG GCGCACTGCA TTGGTGGATC AGCTGCCGGG AGACTGGAAT ATCAAGGAAG GTGTTTACGC GCTCACACCG CGCCCCGACC TAATCGAGTC ACGATTCCTC ATCTATGTCC TCCACTCATC GCTGGTCCGA AATCGCATCT TGGCTCAGGC TGATGGATCA ACCGTGGCGA GCATCTCCAT GGCGACGCTT CGACGGATCC GGATTCCCGT GCCACCGCTG GAGGTTCAGC GTGAGATCGT GCGGATCTTG GATCAGTTCA CTGAGCTGGA GGCGGAGCTG GAGGCGGAGC TGGAGGCGGA GCTGGAGGCG CGTAAGCGCC AGTACACCCA CTACCGCTAC AGCCTCATAT TCGGCGATAC GGACAATGCC CGTGAAAGGG TGCGCCTGAA GGACGTTTCG ACGTTCAAGC GGGGAACAGC GTTCACGAAG CGACAAGCAC GCAAGGGGCA ATATCCAGTG GTTGCCAATG GACCAGAACC GATTGCCTAC CACGATGAGT TCAATCGGGA TGGTGAGTTT CTTGTGATTG CACGGTCGGG CGCGTACGCA GGAGCAGTTA CTTACTGGCA CGGACCGACG TTCTTGACTG ATGCGTTCAG CATACATCCA GACCCACAGC ACCTCGATCT GCGGTATGCG TATCACCTCC TGACAGCGAT GCAGACTGAG CTGCACGGAA TGAAGGCAGG GAGCGGTGTC CCTCATGTGC GGGTGCGTGA AATTGAGGAG CAGCAAGTAG CAATCCCGAG TCTTATAGTG CAGCAGAATG TATCCGCGCG GCTCGATGAC TTCGACAGAC TCGTGAACGA CATCAGTGTG GGCCTTCCGG CCGAGCTAGC TGCACGTCGC AAGCAGTACG AGTACTACCG GGATAAGTTG CTCACTTTCG AGGAGGCGAC ACCATGA
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Protein sequence | MSHIDELVAQ YCPVGVELRE IGDVITALRT GLNPRTNFKL NTPGSANFYV TVRELGGFVI RCSDKTDRVD DAGLEVIQRR SKLQAGDVLF SGTGTIGRTA LVDQLPGDWN IKEGVYALTP RPDLIESRFL IYVLHSSLVR NRILAQADGS TVASISMATL RRIRIPVPPL EVQREIVRIL DQFTELEAEL EAELEAELEA RKRQYTHYRY SLIFGDTDNA RERVRLKDVS TFKRGTAFTK RQARKGQYPV VANGPEPIAY HDEFNRDGEF LVIARSGAYA GAVTYWHGPT FLTDAFSIHP DPQHLDLRYA YHLLTAMQTE LHGMKAGSGV PHVRVREIEE QQVAIPSLIV QQNVSARLDD FDRLVNDISV GLPAELAARR KQYEYYRDKL LTFEEATP
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