Gene Jden_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1499 
Symbol 
ID8381787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1608268 
End bp1609833 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content54% 
IMG OID645004247 
Producttype I restriction-modification system, M subunit 
Protein accessionYP_003161451 
Protein GI256832724 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID[TIGR00497] type I restriction system adenine methylase (hsdM) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.1762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGA CCACAAAAGA ATCCCAACGA GCAGAGCTTC ACAAAACCAT TTGGCGGATC 
GCGAATGACC TTCGCGGTAG CGTCGATGGC TGGGACTTCA AAACCTACGT GCTCGGTATG
CTCTTTTACC GGTTCATCTC TGAGAACCTC ACGGCCTACC TCAACAAGGC GGAACATAAG
GCTGGTGACG CCAGCTTTGA CTATGCTCGA CTTCCCGATG CTCAAGCTGA GTTTGGCCGC
AAGGAGACCG TTGAGGAGAA GGGTTTTTAC ATTCTTCCTT CGGATCTCTT CCAGAACGTT
CGGCGTAACG CCGCCACTGA TCCTAACCTC AACGAGACGC TGGAGCGGGT CTTCAAAGAT
ATTGAAGGGT CAGCGCTCGG CACGGAAAGC GAAGGCGACC TCAAGGGCCT GTTCGACGAC
CTTGACGTGA ACAGCTCCAA GCTCGGTAAC ACGGTGGCCA GGCGTAACGA GAAGCTTGTG
AAGCTCCTTG ATGCGATCGG TGACCTCCCG CTGGGCAATT TTGAAGATAA CTCGATTGAC
CTGTTTGGTG ACGCCTACGA ATACCTCATG CAAATGTACG CCTCACAGGC TGGTAAGTCC
GGTGGCGAGT ACTACACGCC GCAGGAAGTC TCTGAGGTGT TGGCGCGGAT CGCGGTTGCT
GGCAAGAAGC GTGTCAATAA GGTGTATGAC CCGGCGGCAG GGTCAGGTTC GCTGCTGCTG
AAGTTCGCGA AGGTGCTCGG CAAAGAGAAC GTGGGTGGGT TCTATGGGCA GGAAATCAAC
CTGACCACGT ACAACCTTGC GCGTATCAAC ATGTTTTTGC ATGACGTGAA CTATGAGAAG
TTCTCACTCG CTCATGGTGA CACCCTCACT GACCCGCAGC ATTGGGATGA TGAACCGTTT
GAAGCGATCG TGTCCAACCC GCCGTATTCG ATTAAGTGGG AGGGTGACGC GAACCCTCTC
CTCATTAACG ACGAACGCTT CGCACCAGCA GGTGTGCTTG CGCCGAAGTC AAAGGCTGAC
CTTGCCTTCA CGATGCACAT TCTGTCGTGG CTGGCCGTGA ATGGAACAGC AGCGATTGTT
GAGTTCCCTG GTGTGCTCTA CCGTGGTGGC GCTGAGGCGA AGATCCGCAA GTATTTGGTT
GACAATAACT ATGTTGACGC GGTGATTCAG CTGCCACCAG ATTTGTTCTT TGGAACCACG
ATCGCCACGT GCATTATCGT GTTGAAGAAG TCCAAGGCTG ACAATGCGGT GCTTTTTGTT
GACGCTTCGA ATGAGTTCAA GCGAGTGGGC AACAAGAACA AACTCCTGCC CGACCACCAA
AAGAACATCC TCGATGCTCT TGAGCAGCGT GTTCCTGTCG ACCACCGTGT CGCACTCATC
TCGAATGAGG AGATCGCCGC GAATGACTAC AACATTGCCG TGTCCTCGTA TGTTGAAGCC
GAAGACACAC GTGAAGTCAT CAACATCACC GAGCTCAACG CCGAGATCGC CCGCATTGTC
GCCCGCCAAG CCGAACTACG GACATCCATT GATGCCATCG TCGCCGACCT GGAGGGCACC
AAGTGA
 
Protein sequence
MSPTTKESQR AELHKTIWRI ANDLRGSVDG WDFKTYVLGM LFYRFISENL TAYLNKAEHK 
AGDASFDYAR LPDAQAEFGR KETVEEKGFY ILPSDLFQNV RRNAATDPNL NETLERVFKD
IEGSALGTES EGDLKGLFDD LDVNSSKLGN TVARRNEKLV KLLDAIGDLP LGNFEDNSID
LFGDAYEYLM QMYASQAGKS GGEYYTPQEV SEVLARIAVA GKKRVNKVYD PAAGSGSLLL
KFAKVLGKEN VGGFYGQEIN LTTYNLARIN MFLHDVNYEK FSLAHGDTLT DPQHWDDEPF
EAIVSNPPYS IKWEGDANPL LINDERFAPA GVLAPKSKAD LAFTMHILSW LAVNGTAAIV
EFPGVLYRGG AEAKIRKYLV DNNYVDAVIQ LPPDLFFGTT IATCIIVLKK SKADNAVLFV
DASNEFKRVG NKNKLLPDHQ KNILDALEQR VPVDHRVALI SNEEIAANDY NIAVSSYVEA
EDTREVINIT ELNAEIARIV ARQAELRTSI DAIVADLEGT K