| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1476 |
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| Symbol | |
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| ID | 8380646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1582447 |
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| End bp | 1584546 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645004223 |
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| Product | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
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| Protein accession | YP_003161428 |
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| Protein GI | 256832701 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
[TIGR02927] 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.357899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACA CTGTGAAAAT GCCCGCGCTG GGCGAATCCG TCACCGAAGG AACCGTTACC
CGCTGGCTGA AGAACGTGGG CGACACCATC GAGGTCGACG AACCACTCCT TGAGGTGTCC
ACCGACAAAG TCGACACCGA AATTCCCTCT CCATTTTCTG GAGTACTCGA AGCTATCCTC
GTCGAAGAAG ATGACACTGT GGAGGTCGGG GCCGATCTCG CAACAATTGG TGACGGCTCA
GGCGCGTCAT CAGCTCAGCC TGCAACCTCC GAACAGCCTG CTTCGCCACA AGAGGCTGCT
CCTGCTCAAC AGCAGGCACC TGCCGAGCAG CCAGCTCAGC CCTCAGCTGC AACACCGGCT
TCAGGCGATG GCGAAAAGGT CACTCTTCCC GCACTCGGCG AATCCGTCAC CGAAGGAACC
GTGACCCGCT GGCTGAAGAA CGTGGGCGAC ACCATCGAGG TCGACGAACC ACTCCTTGAG
GTATCCACCG ACAAAGTCGA CACCGAGGTG CCCTCACCGG TCGCTGGTGT GGTCACACAA
ATCCTTGTCG AGGAAGACGA AACAGTTGAG GTCGGCGCAG TCCTCGCCAT CATCGGCGAC
GGCTCCACAC CCGCACCACA ACAACAACCA GCACAACAGC CTGCTTCGCC ACAAGAGGCT
GCTCCTGCTC AACAGCAGGC ACCTGCCGAG CAGCCAGCTC AGCCCTCAGC TGCAACACCG
GCTTCAGGCG ATGGCGAAAA GGTCACTCTT CCCGCACTCG GCGAATCCGT CACCGAAGGA
ACCGTTACCC GCTGGCTGAA GAACGTGGGC GACACCATCG AGGTCGACGA ACCACTCCTT
GAGGTGTCCA CCGACAAAGT CGACACCGAG GTGCCCTCAC CGGTCGCTGG TGTGGTCACA
CAAATCCTTG TCGAGGAAGA CGAAACAGTT GAGGTCGGCG CAGTCCTCGC CATCATCGGC
GACGGCTCCA CACCCGCACC ACAACAACAA CCAGCAGAAG AACCCGCCCC GGTGGCACCA
CAGCCTGCGG TGCCTTCGGA AGCAGCACAA CAAGCGGCCC CACCTGCGCA GTCCTCCCCC
ACTCCGGCTC AGGAATCTGC TGCGACACCA GCTCGTGCAC CGCAGTCAAC TCCCGCAGCA
GCACCTGCTG CACGAGGTGG ATACGTGACA CCACTGGTCC GCAAGCTCGC CTCCGAGAAG
GGAGTGGACC TGTCCACGGT GACAGGCACC GGCATTGGCG GACGCATCCG CAAGGAAGAT
GTGCTCGAGG CTGCACAGAA AGCTGCGCAA CCCGCTGCCG CACCGCAACG AGCTGAACAG
CCAGCACCAA GCACATCGAC AGATGGCTCA ACAGCACCCA CGACAATCCT CCCGGTCTCG
GAACTGCGCG GAACAACAGA GAAAGCGTCA CGCCTGCGCC AGATCATTGC TGAGCGCATG
GTCGAAGCAC TCCAGACGCA AGCTCAACTC ACCACCGTCA TGGAAGTCGA CGTCACCGCA
GTTGTGCGGC TACGGTCCAA GGTCAAGGAA GCGTTCAAAG CAAAGCACGG TGCGAACCTC
ACGTTCCTGT CGTTCTATGC GTTAGCCGCA GCCGAAGCGT TGAAGGCTTA CCCGAAGATC
AACGGTGTCC TGGAAGACAA AACCATCACC TACCCAGACG CCGAACACAT CGGTATCGCC
GTGGACACAC CACGTGGGTT GTTGGTTCCC GTCATCAAGA ACGCAGGCGA CCTCGACCTC
GCCGGATTCG CCACCTCGAT CACCGACCTT GGTTCACGGA CCCGCGATAA CAAGGTCAAA
CCCGATGAGT TGTCAGGCGC TACCTTCACC ATCACCAACA CAGGGTCTGG TGGCGCCCTG
TTCGACACAC CCATTGTCCC GGTAGGAACC TCCGCGATCC TGGGAACAGG CACCATGGTG
AAACGACCAG CAGTGGTTGC TGGCCCTGAC GGTGAGGATG TCATCGCCAT CCGCACCTTC
ACCTACCTGT CCATTTCCTA CGACCACCGG CTGGTTGACG GAGCTGACGC GTCACGCTTC
TTGTCCGCGG TCAAGGCTCG GATCGAAGAG GGTAAGTTCG AGGACTTCCT CGGCCTGTAG
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| Protein sequence | MSNTVKMPAL GESVTEGTVT RWLKNVGDTI EVDEPLLEVS TDKVDTEIPS PFSGVLEAIL
VEEDDTVEVG ADLATIGDGS GASSAQPATS EQPASPQEAA PAQQQAPAEQ PAQPSAATPA
SGDGEKVTLP ALGESVTEGT VTRWLKNVGD TIEVDEPLLE VSTDKVDTEV PSPVAGVVTQ
ILVEEDETVE VGAVLAIIGD GSTPAPQQQP AQQPASPQEA APAQQQAPAE QPAQPSAATP
ASGDGEKVTL PALGESVTEG TVTRWLKNVG DTIEVDEPLL EVSTDKVDTE VPSPVAGVVT
QILVEEDETV EVGAVLAIIG DGSTPAPQQQ PAEEPAPVAP QPAVPSEAAQ QAAPPAQSSP
TPAQESAATP ARAPQSTPAA APAARGGYVT PLVRKLASEK GVDLSTVTGT GIGGRIRKED
VLEAAQKAAQ PAAAPQRAEQ PAPSTSTDGS TAPTTILPVS ELRGTTEKAS RLRQIIAERM
VEALQTQAQL TTVMEVDVTA VVRLRSKVKE AFKAKHGANL TFLSFYALAA AEALKAYPKI
NGVLEDKTIT YPDAEHIGIA VDTPRGLLVP VIKNAGDLDL AGFATSITDL GSRTRDNKVK
PDELSGATFT ITNTGSGGAL FDTPIVPVGT SAILGTGTMV KRPAVVAGPD GEDVIAIRTF
TYLSISYDHR LVDGADASRF LSAVKARIEE GKFEDFLGL
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