| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1452 |
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| Symbol | |
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| ID | 8380623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1561375 |
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| End bp | 1563126 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645004200 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_003161405 |
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| Protein GI | 256832678 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0835225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.133355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGA AAAACTACGT CCCAGGCCTT TCAGCAGGGC GTCAAAGCCT TGGCGGTACA
ATCGTCAAAT GGATCACCTC TACTGACCAC AAGACGATCG GGTACATGTA CCTGATCGCC
TCGTTCATCT TCTTCTGCAT CGGTGGCCTC ATGGCCCTGG TTATTCGTGC TGAACTCTTT
GAACCTGGCA TCCAAATCGT TCAGAGCAAC GAGCAGTACA ACCAACTGTT CACCATGCAC
GGAACGATCA TGCTCCTGCT CTTCGCGACC CCGTTGTTCG CGGGTTTTGC CAACGTCCTG
GTTCCGCTCC AAATTGGTGC CCCAGACGTT GCCTTTCCCC GGTTGAACGC ATTCGCGTTT
TGGCTCTTCC TTTTTGGTGG GATCATTGCA TCTTCGGGGT TCTTCACACG TCAAGGCGCA
GCCTCCTTCG GTTGGTTCGC CTACGCCCCG CTCTCAAGCA CGACCTACAG TCCAGGGCTC
GGTGGTGACT TGTGGGTGTT TGGGCTCGCG CTTGGTGGGT TTGGAACAAT CCTTGGTGCA
GTCAACTTCA TCACGACGAT CATCACGATG CGTGCCCCCG GTATGACGAT GTTCCGGATG
CCGATCTTCA CGTGGAACAC CCTCGTGACC TCGATGCTCA TCCTGATGGC GTTCCCGCCA
CTTGCCTCCG CCCTCTTCGC GCTGGGAGCT GACCGTCGTT TCGGAGCGCA AATCTTCAAC
CCCGAAAACG GCGGGGCAAT TCTGTGGCAG CACCTCTTTT GGTTCTTTGG TCACCCCGAG
GTATACATCA TCGCGTTGCC GTTCTTCGGG ATCGTGTCTG AAATCTTCCC TGTTTTCTCT
CGCAAGCCAA TCTTTGGCTA CAAAGGCTTG ATCTACGCAA CCATTGCGAT CGCAGCGCTC
TCCGTGACCG TGTGGGCCCA CCACATGTAT GTGACTGGAG CTGTACTTCT CCCGTTCTTC
GCCTTCATGA CCATGGCGAT TGCTATCCCA ACCGGTGTGA AGTTCTTCAA CTGGATTGGG
ACAATGTGGC GCGGAAAGAT CACCTTCGAA ACCCCGATGC TGTGGGCACT AGGATTCCTC
GTGACCTTCC TCTTTGGTGG ATTGACCGGG GTGATCCTGG CCAGCCCAGC CATGGACTTC
CACATCTCTG ACACCTACTT CGTGGTTGCA CACTTCCACT ACGTTGTCTT TGGAACAGTC
GTGTTTGCCA TGTTCGCTGG ATTCTACTTC TGGTGGCCCA AGTTCACCGG AAAGATGTTG
AATGAGCGAC TTGGAAAAGT CCACTTCTGG TTGCTGTTTA TCGGATTTCA CACCACATTC
CTCATCCAGC ACGTCCTCGG TGTGATCGGT ATGCCGCGTC GCTACGCTGA TTACCTCCAA
GAAGACGGTT TCACCTTCAT GAACCAGGTC TCCACGGTCG GATCATTTGT TCTTGCTGCA
TCCACATTGC CGTTCCTGTG GAACGTTTAC GTCACCGCGA AGAACGCTCC TCGGGTGACA
GTTGATGACC CATGGGGATT TGGCGCTTCT TTGGAGTGGG CAACATCATG CCCACCACCA
CGACACAACT TCACGTCACT ACCACGGATC CGCTCTGAGC GACCAGCACT CGACCTGCAC
TACCCCGAGA TCGAAGCAAT GGAACATAAG GTGCCAGGGC AGACCCCACT TGACGATGTG
TACGGTGAAG CAGACCGAAC CGGCCAAGAA CAAGTCACCC ATGAACGCGT CCAAAAGAAG
GATGGTCACT GA
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| Protein sequence | MAEKNYVPGL SAGRQSLGGT IVKWITSTDH KTIGYMYLIA SFIFFCIGGL MALVIRAELF
EPGIQIVQSN EQYNQLFTMH GTIMLLLFAT PLFAGFANVL VPLQIGAPDV AFPRLNAFAF
WLFLFGGIIA SSGFFTRQGA ASFGWFAYAP LSSTTYSPGL GGDLWVFGLA LGGFGTILGA
VNFITTIITM RAPGMTMFRM PIFTWNTLVT SMLILMAFPP LASALFALGA DRRFGAQIFN
PENGGAILWQ HLFWFFGHPE VYIIALPFFG IVSEIFPVFS RKPIFGYKGL IYATIAIAAL
SVTVWAHHMY VTGAVLLPFF AFMTMAIAIP TGVKFFNWIG TMWRGKITFE TPMLWALGFL
VTFLFGGLTG VILASPAMDF HISDTYFVVA HFHYVVFGTV VFAMFAGFYF WWPKFTGKML
NERLGKVHFW LLFIGFHTTF LIQHVLGVIG MPRRYADYLQ EDGFTFMNQV STVGSFVLAA
STLPFLWNVY VTAKNAPRVT VDDPWGFGAS LEWATSCPPP RHNFTSLPRI RSERPALDLH
YPEIEAMEHK VPGQTPLDDV YGEADRTGQE QVTHERVQKK DGH
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