Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1449 |
Symbol | |
ID | 8380620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1558351 |
End bp | 1559994 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645004197 |
Product | cytochrome b/b6 domain protein |
Protein accession | YP_003161402 |
Protein GI | 256832675 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0373061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0523763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAACGA CTTCCCCCTC GACGCCCCTG GGCGCAACCG CTGATTACCT GGATCAACGC ACGGGTCTTG GCAAAGCTGT CAAAGAGTTT TCCCGCAAAG TATTTCCTGA CCACTGGTCA TTTATGCTTG GTGAGATTGC CCTGTACTCC TTTGTGGTCC TGTTGATTTC TGGGTTCTTC CTCACAATGT TCTTTGTTCC CTCAATGGGG CTCATCGAAT ACCACGGCCC AGTGGAATCC ATGGACGGGC AACTCATGTC CGAAGCCTTT GCCTCAACCT TGAAGATTTC GTTCGAGGTT CGTGGCGGTC TGCTGATGCG TCAGATTCAC CACTGGGCAG CGCTACTGTT CATGGCTGCG ATTGTGACGC ACATGATGCG CGTGTTCTTT ACCGGTGCGT TCCGTAAGCC GCGCGAGTTG AACTGGCTGG TTGGGTTTGT CCTGATGATC CTTGGTCTTC TGGCTGGTTT CACTGGGTAC TCTCTGCCCG ATGATGTTCT GTCTGGTAAC GGGCTACGCA TCACTGACGG TGTCGTTAAA TCTATTCCGA TTTTGGGTTC GTACCTGTCG TACTTCGTTT TCGGTGGCGA GTTCCCCGGC GAAGACATCA TTCCGCGCTT GTTCGCCTTG CACGTCATGG TCGTTCCCGC ACTGATTTTG TCGCTCATTG CACTGCACCT GTTGTTTGTG GTGCTCCACA AACACACTCA GTACCCTGGC GGTGGACGCA CTGACAAGAA CGTTGTCGGG TTCCCACTGT TCCCGGTCTA CGTGGCAAAA GCTGGTGGAT TCTTCTTCGT CGTCTTCGGT GTACTCGCAC TGATGGGTGG GGTGATGTCC ATCAACAACG TGTGGAACTA TGGGCCCTAT GACCCCTCCC CTGTGTCAGC TGGTGCGCAA CCTGACTGGT ACATGTTGTT CCTCGAAGGT TCCCTTCGTT TGATGCCGGG ACAGACCGAA TATGTCATTG CCGGCTACAC GCTCTCCTTG AACGTGCTGA TCCCGGCTGT TGTTATTCCG GGCTTGCTGT TCACTATCTT GGCGTTGTAC CCGTTCATTG AAGCCAAGGT CACCGCCGAC AAGAATGAGC ACCATGTTCT TGACCGCCCA CGCAACGTCC CCACACGGAC CGGCATTGGT GTAGCCATCA TCGTGGCGTT TGTTGTCCTC GCTGTTGCCG GGTCGAACGA CTTGATTGCA ACCCATTTCG ACATGTCGCT CAACCTCATC ACTTGGGTGC TGCGTATCGC GTTCTTCGCT GCTCCAGTCG CCGCCTTTAT GGTGACTAAA CGCATGTGCC TTGCGTTGCA GCGTAAGGAC CGCGAAATTG TTCTCCATGG TCATGAGAGT GGGGGAATCT TCCGGTTTGC CAACGGTGAA TACATCGAGG TCCATAAGCC ACTCAGCGAA CAAGAACGGT GGGTGCGCGT GAACTATCCA GCACACAAAC CGCTTGAGAT CGAACCAGCA GAGGACTCTC GTGGTGTCCG CCGTAAAGGC TACGCCGCTG ACCGCCGCTG GCAACGTCTG TCGCAGTTCT TCTATGAGGA CCGCGTGGAA CCGGTTCGCC CCTCCGAGTT GCACCAGCAC CACGAACAGG GTGAACTTGA GTCAGGCGAG ACAAAGCCTT CGCTTGGTCA CTGA
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Protein sequence | MTTTSPSTPL GATADYLDQR TGLGKAVKEF SRKVFPDHWS FMLGEIALYS FVVLLISGFF LTMFFVPSMG LIEYHGPVES MDGQLMSEAF ASTLKISFEV RGGLLMRQIH HWAALLFMAA IVTHMMRVFF TGAFRKPREL NWLVGFVLMI LGLLAGFTGY SLPDDVLSGN GLRITDGVVK SIPILGSYLS YFVFGGEFPG EDIIPRLFAL HVMVVPALIL SLIALHLLFV VLHKHTQYPG GGRTDKNVVG FPLFPVYVAK AGGFFFVVFG VLALMGGVMS INNVWNYGPY DPSPVSAGAQ PDWYMLFLEG SLRLMPGQTE YVIAGYTLSL NVLIPAVVIP GLLFTILALY PFIEAKVTAD KNEHHVLDRP RNVPTRTGIG VAIIVAFVVL AVAGSNDLIA THFDMSLNLI TWVLRIAFFA APVAAFMVTK RMCLALQRKD REIVLHGHES GGIFRFANGE YIEVHKPLSE QERWVRVNYP AHKPLEIEPA EDSRGVRRKG YAADRRWQRL SQFFYEDRVE PVRPSELHQH HEQGELESGE TKPSLGH
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