Gene Jden_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1439 
Symbol 
ID8380610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1549232 
End bp1550035 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content55% 
IMG OID645004187 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_003161392 
Protein GI256832665 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.195165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.358229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCTACT GGTTGATGAA GCGTGTGTTC GTTGGCCCCC TGCTCCGGTT ATTGTTTAGG 
CCGTGGATTA AGGGTGCTGA GAACATACCT GGGGATGGGC CAGCCATTAT TGCGTCTAAT
CACTTGGCTG TCATTGACTC CTTTATTTTG CCGTTGCTTA TTGATCGTGA GATTGTCTTT
ATTGGCAAGT CAGAATATTT CACTGGCAAG GGCTTAAAGG GGCGTATGAC CGCGGGTTTT
ATGCGCGGTG TGGGAACTAT TCCCGTGGAT CGATCGGGTG GCCGGGCAAG CGAAGGTGCG
CTACGCACAG GGCTGAAACG GCTTGGCGAG GGTGGACTTT TCGGTATCTA CCCTGAAGGT
ACGCGCTCCC CTGACGGGCG GCTGTATCGG GGCAAGACAG GTGTTGCACG TCTGGCGTTG
GAATCCGGTG CGCCGGTCAT CCCTGTGGCT ATGGTGGGCA CTGATGTGGC CCAGCCCATT
GGGAGGGTCA TCCCAAAAAT CATGCGATTA GGCGCGGTTG TTGGGGAGCC TCTTGATTTT
TCACGCTATC AGGGTATGGA AAATGACAGG TTTATTTTGC GGTCTGTCAC CGATGAGATC
ATGTATTCGC TGATGACTTT GTCCGGTCAG GAGTATGTGG ACATGTATGC AGCCACAGCG
AAGGCGCGTA TTTCTGCGGG GCTTCCGGTT GAACGGTCTG TGTCCTCTGA AGCGCCGGGT
GGGCGCCCTG CCCCGCAGGT TGATGTGCCC ATGCCTCCAG ACGATGATGC TCCTACTGAC
ACACCTAAGT CCCACACTGT GTGA
 
Protein sequence
MFYWLMKRVF VGPLLRLLFR PWIKGAENIP GDGPAIIASN HLAVIDSFIL PLLIDREIVF 
IGKSEYFTGK GLKGRMTAGF MRGVGTIPVD RSGGRASEGA LRTGLKRLGE GGLFGIYPEG
TRSPDGRLYR GKTGVARLAL ESGAPVIPVA MVGTDVAQPI GRVIPKIMRL GAVVGEPLDF
SRYQGMENDR FILRSVTDEI MYSLMTLSGQ EYVDMYAATA KARISAGLPV ERSVSSEAPG
GRPAPQVDVP MPPDDDAPTD TPKSHTV