| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1422 |
|---|
| Symbol | |
|---|
| ID | 8380595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1529570 |
|---|
| End bp | 1530340 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645004172 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003161377 |
|---|
| Protein GI | 256832650 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0724524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACACT ATGTGCTGCG GGTGCCTGGC TCACGACATA GGTTGAGGAG CGCACTTGGT
CGCGTGAAAG CCCTCCTGCC CACGGTGGCC TGGGGGATAG TTGTTGCTCT TGTGCTACCG
CCTGTGGCCC ACAACAATCA CGATCCAGAA CTCGACATAC TCCCGTCCTG CCCAGGCATC
ACACTTGGCG TGGATTACGG TGTGCTTGAC CACAACGCGG AACTTGTGTG CGTCACCGGA
CTCACCCAGA CCATCACAGG TCGTGAACTT GCTCGTCACG CTGGCATCAC ACTCGAGGGA
ACAGCACGGA TCCCCGCGTT TGTGTGCCGA GTCCAAGGAC GCCCAACGGC CACCGAACGC
ATCCCTGCTG CGGGACACCA CATCACCGAG GCGTGTGTAC ACACCCCTCA AGCCACTGCG
TACTGGACCT TGTGGGTCAA GGAAAACACC ACCACAAGCT TTGAATATGC TCACTATGGC
GTTGATACGA TTCGTCTGAC ACACGGTGAC GTCCTGGTCT TGTCCTACCA CACCGGAGAC
ACCCCACCGA CGACACCAGA CACCGCGCTC GCTGACCTGC AAGTACGCAC AGTCTCCGTG
AATGACCATC CCCCTGACAA CACACCGGCA GAAACGATCA CCACGACATC GGTGACCAAC
AACCGGGCAG TCATCATCAC GTGTTGCATC ATTGCCGCAG CAGTAGTCCT CGTCATTATT
CGCCGACGCG CTCAAAGAAC CACCCGACAC ACGCCCGGAA CACCGCTGTG A
|
|---|
| Protein sequence | MRHYVLRVPG SRHRLRSALG RVKALLPTVA WGIVVALVLP PVAHNNHDPE LDILPSCPGI
TLGVDYGVLD HNAELVCVTG LTQTITGREL ARHAGITLEG TARIPAFVCR VQGRPTATER
IPAAGHHITE ACVHTPQATA YWTLWVKENT TTSFEYAHYG VDTIRLTHGD VLVLSYHTGD
TPPTTPDTAL ADLQVRTVSV NDHPPDNTPA ETITTTSVTN NRAVIITCCI IAAAVVLVII
RRRAQRTTRH TPGTPL
|
|---|
| |