| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1418 |
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| Symbol | |
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| ID | 8380592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1522610 |
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| End bp | 1526155 |
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| Gene Length | 3546 bp |
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| Protein Length | 1181 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645004169 |
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| Product | methionine synthase |
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| Protein accession | YP_003161374 |
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| Protein GI | 256832647 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.156555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACTC CACGCGCTTC ACGTCTTCGG CAGGCCCTGA CCCATCGCGT TGTCGTCGCT
GACGGCGCAA TGGGAACAAT GCTTCAAGCA GCATCACTCA CCCTTGAGGA CTTTCACGGC
TTAGAAGGCT GCAACGAAAT ACTCAACGTC ACCGTCCCTG ACGTGATCGA GTCCATCCAC
GACGCCTACT TTGCGGTGGG AGTCGACTGC GTTGAATCCA ACACATTCGG TGCCAACTGG
TCCAACCTCT CCGACTACGA GATCGACGAC CGGATCTACG AACTCGCTTA CGCTGGCGCA
TCGATTGCAC GACGCTCCGC CGACCGAGCA GCAACCGAAC AACAGCGAGA CACCTGGGTC
CTCGGCTCCA TGGGCCCAGG CACAAAACTC CCAAGCCTGG GCCACACCAC CTACGCCCAC
CTCAAAACAA CCTTCACCCA GCAGGCGCTT GGGCTCCTGG ACGGTGGTGC CGACGCGTTT
CTCATCGAAA CAGCCCAAGA CATACTCCAA GCCAAAGCAG CAATCAACGC CTGCCACGCC
GCCATGGAAG AACGAGGCAA ACGGATCCTC ATCATGGTGT CAGTCACCGT GGAAACCACC
GGCACCATGC TCATGGGCTC CGAAATCGGT GCTGCACTCA CCGCACTCAG CGCCCTCAAC
ATCGACAGCA TCGGGCTGAA CTGTGCCACT GGACCAGCAG AAATGTCCGA ACACCTCCGC
CACCTGTCCA AACACGCCCC CATCCCGGTC ACCTGCATGC CCAACGCAGG ACTGCCCGTC
CTCGGGAAAA ACGGGGCCGA ATACCCACTG ACACCCACAG AACTCGCGGC AGCGCATCGT
CAATTTGTCA CCGAGTTTGG GCTCGGGCTC GTGGGAGGAT GCTGTGGAAC CACACCCGAA
CACCTCGGCG CAGTTGTTGC AGCAGTACGC GACACTTCCC CGGCGAAGCG GACGGTCACC
GTAGAAAACG GGGTGGCCTC GCTGTACAGT CACACCGACT TCCACCAAGA TTCCTCGTTC
CTGGCGATCG GGGAACGCAC CAACGCCAAT GGTTCCAAAG CTTTTCGTGA GGCCATGCTC
GCCGAAAATT GGGACGAATG CGTGACCATC GCCCGCTCGC AAACCCGCGA CGGCGCCCAT
GTTCTCGACG TCTGCGTTGA TTACGTCGGC CGTGACGGAG TTGCCGACGT CACCAACGTC
GTCTCACGGC TTGCCTCCGC GTCAACGCTC CCCCTGGTCA TCGACTCCAC CGAACCTGAC
GTCATCAAAG CTGCCCTCGA ACTCATCGGC GGGCGACCAG TGGTCAATTC AGTGAACTTT
GAAGACGGCG ATGGTCCCAC TTCCCGCTAC GCCCGCATCA TGCCGCTTGT CAAAGAACAC
GGCGCCGCAG TTGTCGCCCT GACGATCGAC GAAGAAGGCC AAGCGCGCAC ACGGGACGCC
AAAGTCGCCA TCGCTACCCG GCTTATTACC GACCTTACGA CACGGTGGGG CATGTCCGTG
ACCGACATCA TCGTGGACAC CCTCACATTT CCCATTGCGA CCGGTCAGGA GGAAACCCGC
CGCGACGCCA TCGAAACAAT CCACGCGATC AAAGACATCA CCACCGCATT TCCTGGAATT
CACACCACAC TCGGTGTCTC GAACGTGTCC TTTGGGCTTA GCCCAGCCGC CCGCCACGTT
CTCAACTCGG TGTTCCTCCA CGAAGCAGTC GCAGCAGGAC TTGATTCAGC GATTGTGCAT
GCCGCAAAAA TCATGCCACT CAAGAACATC CCCGACGAAC AGCGGGAGGC AGCCCTCGAC
CTCATCTGGG ACCGCCGTCG ATACGACGAC GAGGGTGTGA TGATCCATGA CCCGCTCGCC
CATTTCCTCA ACGTGTTTTC TGGTGTCGAC GCCGCCAGCC TCAACCAGAG CCGAGCCGAA
GAACTCGCGG CACTCCCACT GACAGAACGT CTCGAACGTC GGATCATCGA TGGCGATAAC
AAAGGTCTCA CCGGCGACCT CGACCAAGCG TTGTCACAGG GGATCTCCGC ACTCGACATC
ATCAACGATC ATCTACTCGC AGGAATGAAA GTGGTCGGCG ACCTCTTTGG GCGCGGGGAG
ATGCAACTCC CGTTTGTGTT GCAGTCCGCT GAAACCATGA AAGCCGCCGT AGCCTGGCTC
GAACCACACA TGGAACGCAC GGAATCCGCG GGTAAAGGAA CCATGGTGCT CGCCACGGTG
CGCGGCGATG TCCACGACAT TGGGAAGAAT CTTGTTGACA TCATTTTGAC CAACAACGGC
TACAACGTCA TCAACATTGG GATCAAACAG TCCATCAACG CCATGATTGA GGCAGCAGAA
GAGCACAACG CTGATGTCAT CGGAATGTCT GGACTTTTGG TGAAATCTAC CGTGGTCATG
AAAGAAAACC TTGAGGAGCT CAACTCCCGC GGGTTGGCGC GAAAGTATCC CGTTCTTCTC
GGGGGAGCCG CGCTCACCCG CGTTTATGTG GAAGATGACC TTGACGAGGT GTATGACGGC
GTAGTTCGTT ATGCACGCGA CGCGTTTGAA GCCCTGCGAC TTATGGATTC TCTGGTGGCC
ATTGCACGAG GGGCAAACTC GAACGATGTT GACCTTCCGC CTCTCAAGAA AAGACGTCAC
AACGTTGTCA CAGTGACTCA AACAGCTGAA GAAGATCTTC CCGAACGGTC CACCATCGCA
GCGGACAACC CGATCCCTAC CCCGCCGTTC TGGGGCACCC GGGTGGTGAA AGGAATCCAC
CTGGCTGACT ATGCCGCAAT GCTCGACGAA CGAGCAACCT TCATGGGGCA ATGGGGACTC
AAACCAACTC GTTCTGGTGA TGGCCCCAGC TATGAGGAAC TCGTCGAGCA CGAAGGACGA
CCCCGCCTGC GCGCCTGGCT TGATCGAATT GCCACCCAAG ACATCTTCGA TCCGACCGTT
CTCTACGGGT ATTTTCCGGT GTACGCGGAG GGGAACGATG TCGTCCTCCT CCACCACGAG
GGACCTGACG GTGGCTCCGA AGGTGAACCA TTGACGGAAC GCATGCGGTT CACCTTTCCA
CGACAACGGC GTGACCGGCA CCTATGCCTT GCCGACTTTG TTCAATCACG TGAGCGGTTC
TTCGAGACGG GCACACCTGA TGTTGTTGCT GTTCAGCTGG TGACCATTGG CGACAAAGTC
TCCGAACACA CCGCCCGCAT GTACGCCGAC AACCAGTACC GTGACTACCT GGAACTGCAC
GGTCTCTCCG TGCAAATGAC AGAAGCCCTT GCTGAGTTCT GGCATTCTCG TGTCCGCGAA
GAGTTGGGGT TCGCTGATGA GGAACCTGAC ACCACCGATG GTTTGTTCTC GTTGGAGTAT
CGCGGCGCAC GGTTCTCCTT GGGATACCCA GCCTGTCCTG ACATGGAAGA CCGCCGTAAA
ATTGTGCGCC TGCTTCGGGC TCGTGACTAC GGTGTGGAAC TTAGTGACGA GTTGCAGCTT
CACCCCGAGC AGTCAACGGA CGCGTTCGTG TTCCATCACC CAGAGGCAAA GTACTTCTCG
GTGTGA
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| Protein sequence | MDTPRASRLR QALTHRVVVA DGAMGTMLQA ASLTLEDFHG LEGCNEILNV TVPDVIESIH
DAYFAVGVDC VESNTFGANW SNLSDYEIDD RIYELAYAGA SIARRSADRA ATEQQRDTWV
LGSMGPGTKL PSLGHTTYAH LKTTFTQQAL GLLDGGADAF LIETAQDILQ AKAAINACHA
AMEERGKRIL IMVSVTVETT GTMLMGSEIG AALTALSALN IDSIGLNCAT GPAEMSEHLR
HLSKHAPIPV TCMPNAGLPV LGKNGAEYPL TPTELAAAHR QFVTEFGLGL VGGCCGTTPE
HLGAVVAAVR DTSPAKRTVT VENGVASLYS HTDFHQDSSF LAIGERTNAN GSKAFREAML
AENWDECVTI ARSQTRDGAH VLDVCVDYVG RDGVADVTNV VSRLASASTL PLVIDSTEPD
VIKAALELIG GRPVVNSVNF EDGDGPTSRY ARIMPLVKEH GAAVVALTID EEGQARTRDA
KVAIATRLIT DLTTRWGMSV TDIIVDTLTF PIATGQEETR RDAIETIHAI KDITTAFPGI
HTTLGVSNVS FGLSPAARHV LNSVFLHEAV AAGLDSAIVH AAKIMPLKNI PDEQREAALD
LIWDRRRYDD EGVMIHDPLA HFLNVFSGVD AASLNQSRAE ELAALPLTER LERRIIDGDN
KGLTGDLDQA LSQGISALDI INDHLLAGMK VVGDLFGRGE MQLPFVLQSA ETMKAAVAWL
EPHMERTESA GKGTMVLATV RGDVHDIGKN LVDIILTNNG YNVINIGIKQ SINAMIEAAE
EHNADVIGMS GLLVKSTVVM KENLEELNSR GLARKYPVLL GGAALTRVYV EDDLDEVYDG
VVRYARDAFE ALRLMDSLVA IARGANSNDV DLPPLKKRRH NVVTVTQTAE EDLPERSTIA
ADNPIPTPPF WGTRVVKGIH LADYAAMLDE RATFMGQWGL KPTRSGDGPS YEELVEHEGR
PRLRAWLDRI ATQDIFDPTV LYGYFPVYAE GNDVVLLHHE GPDGGSEGEP LTERMRFTFP
RQRRDRHLCL ADFVQSRERF FETGTPDVVA VQLVTIGDKV SEHTARMYAD NQYRDYLELH
GLSVQMTEAL AEFWHSRVRE ELGFADEEPD TTDGLFSLEY RGARFSLGYP ACPDMEDRRK
IVRLLRARDY GVELSDELQL HPEQSTDAFV FHHPEAKYFS V
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