| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1404 |
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| Symbol | |
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| ID | 8380578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1506694 |
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| End bp | 1508730 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645004155 |
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| Product | amino acid permease |
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| Protein accession | YP_003161360 |
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| Protein GI | 256832633 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.943899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATAG CATTGGTCAA CGTGTCGGAA ATTATTGATG TCGCCAAGCG GTTGATGCTG
GGGCGGCCCA TGAACTCTGA CCGTCTCGGG CACACACTGT TACCGAAACG GCTTGCGCTT
CCTGTTTTTG CGTCTGACGC GTTGTCGTCG GTCGCCTATG CGCCGGATGA AATTGTGCTC
ACGATGGCAT TGGCGGGTGT CACTGCGGTG ACGATCTCCC CATGGGTTGG GTTAGCAGTC
ATCATCGTGT TGCTGGTGGT TGTTGCGTCC TACCGCCAAA ATGTCCGCGC CTACCCTTCG
GGGGGTGGGG ATTATGAGGT GGTGAGCACA AACCTTGGCC AAGGGGCGGG TGTGTCTGTC
GCGAGCGCGC TTCTTGTTGA CTACGTCCTG ACTGTGGCGG TGTCTATTTC TGCTGGTGCT
CAGTATGCGT CCTCAGCGAT TCCGTGGTTT CGTGGTCATG AAACGTGGGT AGCGATCGCT
GTTGTGTTGT TCTTGATGGT GATGAACCTG CGGGGCGTGA AAGAGTCTGG TCGGTTCTTC
GCTGTTCCCG TGTATTTGTT CATGATCGCT GTTGGGTTGA TCGCCGTGTT TGGTGCATTC
CAGGCGTTCA CTGGTTCCTT GGGCCAGGCC CCGAGTGCCG ATTTCCTTGT GGTCCCGGAC
GCGGCGTTTG ACCAAGGTCT GGTGGGGTTA GGTGGTGCCA TCTTGGTGGC ACGGGCGTTT
GCTTCGGGGT GTGCGGCGCT GACCGGTGTG GAAGCAATTT CTAACGGTGT CCCTTCTTTT
CAGCGACCGA AGTCGCGAAA CGCTGCGACG ACATTGTTGT TGTTGGGGGT CATCTCAGCG
GCCATGCTTG CCACGATTGT CACTCTTGCT GTGGCGACGA ACGTGCGTTA CGTGGAAGAA
CCTGCGCGTC AGCTCACGCA AGCTGATGGT TCCGCGGTTC CCGCATCGTA TGAACAGCAC
CCGGTGTTGT CGCAACTCGC TGAGGTGGTG TTCGCGCAGG CACCGTGGAT GTTCATTGGA
ATTTCTGCTA TTACCGGGCT CATCTTGGTG TTGGCAGCAA ACACGGCCTT CAACGGGTTT
CCCGTCTTAG GGTCGATACT GGCCCGGGAT GGTTACTTAC CGCGCCAGAT GCACACCCGT
GGCGACCGGC TTGCGTTTTC TAACGGCATC ATGACTCTGG CTGTGGGGGC GATCATTCTC
ATTGTGGCGT TTGATGCTCA AGTCACAAGC CTGATTCAGC TGTATATCGT GGGTGTTTTT
ATTTCCTTCA CCTTGTCCCA GTTGGCTATG GTCAAGCATT GGAACTCTCG GCTGCGGGTG
GCCGCTGACC CGCAGGCGCG GCGTTCGATG CGCCGCTCAC GTGTTGTGAA CGCAGTCGGG
TTTGTGATGA CTGGCACGGT ACTGATCGTT GTGTTGGTCA CGAAGTTCCT TCATGGCGCG
TGGATCACTT TGTTGGTGAT GGCGGTGGTG TTCGCGGTGA TGCGTGGCAT CCGTCGGCAC
TACGATTCGG TTTCTGATGA GTTGGAGTTG GGCGAGGATA TCGCTTCGGC ACGTGCTTTG
CCGTCGCGGG TTCATGCCAT TGTGTTGGTG TCTAAGATCC ACAAACCCAC GATGCGGGCC
CTGTCGTATG CGCGTGCAAC ACGCCCCAAT ACGTTGGAAG CAGTCACAGT TGGTGTTGAT
GGTGATGATG GTGAGGAGCT GCTCGCACAG TGGGAGGCGT TAGACGTTCC GGTGCCGTTG
CGGGTGTTGT CGTCGCCGTA CCGTGAAATC ACTCGCCCAG TGTTGTCCTA TGTGCGATCA
ATCCGCCGTC AATCGCCACG AGATTTGGTG GTGGTGTATG TGCCTGAGTA CGTGGTGGGA
CATTGGTGGG AACAGTTTTT GCACAACCAA AGTGCGATGA GGCTGAAGTC ACGGTTGCTG
TTTACCCCTG GGGTGGTGAT CTCTGCGGTA CCGTGGCAGC TGTCATCGTC TCGGACGGTG
GGAATTGAAC ACACACACTT TGCTCAGTCG GGTCAGCCGC GGGCTATGGA TGAATGA
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| Protein sequence | MGIALVNVSE IIDVAKRLML GRPMNSDRLG HTLLPKRLAL PVFASDALSS VAYAPDEIVL
TMALAGVTAV TISPWVGLAV IIVLLVVVAS YRQNVRAYPS GGGDYEVVST NLGQGAGVSV
ASALLVDYVL TVAVSISAGA QYASSAIPWF RGHETWVAIA VVLFLMVMNL RGVKESGRFF
AVPVYLFMIA VGLIAVFGAF QAFTGSLGQA PSADFLVVPD AAFDQGLVGL GGAILVARAF
ASGCAALTGV EAISNGVPSF QRPKSRNAAT TLLLLGVISA AMLATIVTLA VATNVRYVEE
PARQLTQADG SAVPASYEQH PVLSQLAEVV FAQAPWMFIG ISAITGLILV LAANTAFNGF
PVLGSILARD GYLPRQMHTR GDRLAFSNGI MTLAVGAIIL IVAFDAQVTS LIQLYIVGVF
ISFTLSQLAM VKHWNSRLRV AADPQARRSM RRSRVVNAVG FVMTGTVLIV VLVTKFLHGA
WITLLVMAVV FAVMRGIRRH YDSVSDELEL GEDIASARAL PSRVHAIVLV SKIHKPTMRA
LSYARATRPN TLEAVTVGVD GDDGEELLAQ WEALDVPVPL RVLSSPYREI TRPVLSYVRS
IRRQSPRDLV VVYVPEYVVG HWWEQFLHNQ SAMRLKSRLL FTPGVVISAV PWQLSSSRTV
GIEHTHFAQS GQPRAMDE
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