| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1395 |
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| Symbol | |
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| ID | 8380569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1492816 |
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| End bp | 1494900 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645004146 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_003161351 |
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| Protein GI | 256832624 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.977304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.928932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGG TCATCACCTA CGCACACACC CGCGACATCA ACCTTCCCGG CAACGCCGGA
ACACTAGCCC TCATCACTCT CGACAACGGC AAAGACCACA CAAAACCCAC CACATTAGGC
GTACAAGGAA TGCGCAACAT CCACGACGCC GTTAACACTG CACGCACACG CGCATCCAAC
GGTGAGATCG TTGCGGTGGC AATCACCGGC AAACCCTACG TCTTCGCCGC CGGAGCAGAC
CTCAAAGGCG TCAGTTTAGT GGCAACCCAT GACGAAGCCC GCGCACTGGG GACCAACGGT
CACAACACCT TGCGAATCCT GGGAGAAATG ACCGTCCCCA CCTTCGCATT CATTAACGGT
GCAGCTCTGG GAGGCGGGCT GGAAGTTGCA CTGAACTGCA CGCACCGCAC ACTATCCACC
GACGTCAACG CACTCGCCCT TCCCGAAACA GGGCTTGGCC TCATTCCCGG ATGGGGAGGC
ACCTATCTGC TCCCACGTCT AGTTGGCATC GAACACGCCA TATCCATCAT CATTGACCAC
CCCGCACGCA ATCGGCGGCT ACGGGCCAAG GAAGCACACA CGCTCGGCCT TGTTGATGTG
CTTCTTGAAC CCGCCGACTT CCTCGAACAA TCACTTGCTT GGGCGGCACA AGTCATCACC
GGGGACATCA CTGTGTCTCG CCGGCCGCTC GACAATGACG AGCAATGGGC TGCTGCACTC
TCACGTGGTT TTGCCCAGCT TGACGCGACC GTCAACCACG CACGACCAGC GCCCTATCGA
GCGCTAGAAC TCCTCGCGCT TGGGCCTCAC ATCAGCCGTG ATGAGGGGTT CACAGCAGAA
GATGACGCAC TGGCTGACCT CATCATGACC GACGAATTCC GGGCATCAAT ATACGCGTTC
CACGCAGTCA ACGCAGCCAA ACGTCCCAAA GGAGCTCCTG ACTCAGCCCA CGCAGTTCCC
CTTACTGGGG TAGGAATTGT GGGAGCTGGC CTCATGGCCG CACAAATCGC CGTGACCATC
GCCCAGCGAG TTGATGCCCC CATCATCATG CGCGACCTTG ATGAGGAGAA AGTCGCCCAT
GGCATGGAAC ACGTTCATTC CACACTGGAC AAGCTCGTCC AACAAGGTCG ACTCAGCGAA
CAGCGCGCCC GCACAATCGG CCAACGGGTC ACCGGTACAA CAGACATCAC CCAGTTCACA
TCGTGTTCCC TCATTATCGA AGCAGTCACC GAGATCATGT CAGTGAAGAA GCAGGTATTT
GCCGAGCTCG AACACATTGT TTCCCCACAG ACGATCTTTG CCACCAACAC CTCTGCTCTT
TCTATCACCC AGATGTCTGC GCACCTCAAG CACCCAGAAC GAGTGGTAGG AATCCACTTC
TTTAACCCGG TTGCCAAAAT GCCACTGGTC GAAGTGATCT CGACCCCCAC CACCTCCAAA
GAAGCTCTGG CCACAGCTTT TGCTCTCGTG AAGGATCTAC GCAAAACCGC GATCCTTGCC
CATGATCGTC CAGGTTTCAT AGTGAACCGG CTCTTGGTTT TGCTCATGGG GACCGTCATC
AAGGCAGTGG AACAGGGCAC CGATCTTCAC GTTGCAGATC AGGCGTTGAC TCCGTTGGGA
CTCCCCATGC CTCCCTTCGC GCTATTCGAC CTTGTTGGTC CAGCAGTTGG CTTGCATGTC
CTGACCTCAT TACGTGAAGA ACTTGGTGAC CGGTTTGCAC GCTCACCTGG TTTGGAACGT
ATCGTTGCTG ATGGCACCAG GGTTGTTGAT AATGACCCCA GCCGTCTTGG CCCACCACAC
GTGTCGGATC GTCTCACAAC CTATTTTGGT GGCGGCGACC ATCCCCGTCA CGAACAAGAA
GTCCTTGACC TCGTCTTGAC CGCACTGACC AAAGAAATCG GCATGATGCT CGATGAGGGC
GTTGCCCAAG ATGCTACCGA CATTGATGTC GCCATGATCC TGGGCGCCGG TTGGCCATTC
GCGTTGGGTG GAATTACCCC CTACCTTGAC CGCACGGGCT ACACAGAACG ATACCTCGGG
CGGCGATTGC ACGAACCTGG GGTAGCTTCC GTGCCAAGTT CGTGA
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| Protein sequence | MNEVITYAHT RDINLPGNAG TLALITLDNG KDHTKPTTLG VQGMRNIHDA VNTARTRASN
GEIVAVAITG KPYVFAAGAD LKGVSLVATH DEARALGTNG HNTLRILGEM TVPTFAFING
AALGGGLEVA LNCTHRTLST DVNALALPET GLGLIPGWGG TYLLPRLVGI EHAISIIIDH
PARNRRLRAK EAHTLGLVDV LLEPADFLEQ SLAWAAQVIT GDITVSRRPL DNDEQWAAAL
SRGFAQLDAT VNHARPAPYR ALELLALGPH ISRDEGFTAE DDALADLIMT DEFRASIYAF
HAVNAAKRPK GAPDSAHAVP LTGVGIVGAG LMAAQIAVTI AQRVDAPIIM RDLDEEKVAH
GMEHVHSTLD KLVQQGRLSE QRARTIGQRV TGTTDITQFT SCSLIIEAVT EIMSVKKQVF
AELEHIVSPQ TIFATNTSAL SITQMSAHLK HPERVVGIHF FNPVAKMPLV EVISTPTTSK
EALATAFALV KDLRKTAILA HDRPGFIVNR LLVLLMGTVI KAVEQGTDLH VADQALTPLG
LPMPPFALFD LVGPAVGLHV LTSLREELGD RFARSPGLER IVADGTRVVD NDPSRLGPPH
VSDRLTTYFG GGDHPRHEQE VLDLVLTALT KEIGMMLDEG VAQDATDIDV AMILGAGWPF
ALGGITPYLD RTGYTERYLG RRLHEPGVAS VPSS
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