Gene Jden_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1374 
Symbol 
ID8380551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1470619 
End bp1471821 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content60% 
IMG OID645004123 
Productglycosyl transferase group 1 
Protein accessionYP_003161333 
Protein GI256832606 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0717655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0508272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGCC CCCACACTCA CCGCACGCTC CGCGTCGGCA TCGTGTGCCC TTATTCCTTT 
GACGCCCCTG GCGGAGTCCA ATTCCACATC AGAGACCTTG CCGAAGCACT CATCAACCAA
GGCCACGAAG TCTCGGTCCT TGCCCCAGCC GACGACGACA CCCCTGTCCC GCCATACCTC
ACCCCCGCAG GCGCTTCCAT CCCCATCCGA TACAACGGTT CAGTAGCACG CCTGACCTTC
GGGCCACGCG TTGCCGCGAA AGTGAGGCGC TGGCTCAACG ACGGCCAATT CGACATCCTC
CACTTGCACG AACCAATGAC CCCCTCCCTG TCCATGCTCG CCCTGTGGCT CGCACGAGGT
CCCATCGTCG GCACATTCCA CACCGCGCTC ATCCGCTCCC GGGCACTGCA ATTCGTTTAC
CCCATGGTGC GACCCTCGCT CGAAAAATTC TCCGCCCGTA TCGCCGTGTC CGAAGATGCC
CGACGTACAC TGATCGACCA CCTCGGTGGG GACGCCATCG TCATCCCCAA CGGCGTCTAC
GTCAACACAT TCACACATGC GACTCCCACC CCGCAGTGGC AAGGAACCCC CGACGCCCCC
ACTATTGCGT TCCTGGGACG CCTTGACGAA CCCCGCAAAG GACTGCCCGT CCTCAGCCAA
GCCATTCCGC ACATCCTGAC GCACTACCCC AACGCCCGAT TCCTCATCGC GGGCAAAGGC
GATGAAGGTA AACGTCACGC TGAACAACAA CTCAGCAACC ACCTCACCAA CGTTGAATTC
CTTGGTGCCA TCACTGACGA CGAAAAAGCA TCCCTGCTGA CCTCAGTTGA CCTCTACATC
GCCCCACAAA CAGGCGGCGA AAGCTTCGGT ATCGTCCTGG TCGAAGCCAT GAGCGCTGGC
ACCACCGTCA TCGCCTCAGA TCTTGGCGCA TTCGAACGAG TCCTCGACAA CGGACAAGCT
GGCTACATGT TCCGCACCAA CGACCCGAAC GACCTAGCCC GTGCCGTGAT CGAAGCACTC
AACAACCCCA CTGAGCGCAC CCAACGCACC CAACGGGCCA CTGAGTTCGT CCAGCAATTT
GACTGGAAGG AAGTCACCAC GAAAATCCTC ACCGTGTACG AAATGGTCCT GTCCGCGTCC
ACTGCGCTAG GCAAAGTCAC CGAAGACCCC AGTGCACTTA CACACCCACG AGAAGCCTCA
TGA
 
Protein sequence
MTSPHTHRTL RVGIVCPYSF DAPGGVQFHI RDLAEALINQ GHEVSVLAPA DDDTPVPPYL 
TPAGASIPIR YNGSVARLTF GPRVAAKVRR WLNDGQFDIL HLHEPMTPSL SMLALWLARG
PIVGTFHTAL IRSRALQFVY PMVRPSLEKF SARIAVSEDA RRTLIDHLGG DAIVIPNGVY
VNTFTHATPT PQWQGTPDAP TIAFLGRLDE PRKGLPVLSQ AIPHILTHYP NARFLIAGKG
DEGKRHAEQQ LSNHLTNVEF LGAITDDEKA SLLTSVDLYI APQTGGESFG IVLVEAMSAG
TTVIASDLGA FERVLDNGQA GYMFRTNDPN DLARAVIEAL NNPTERTQRT QRATEFVQQF
DWKEVTTKIL TVYEMVLSAS TALGKVTEDP SALTHPREAS