| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1371 |
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| Symbol | |
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| ID | 8380548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1468600 |
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| End bp | 1469358 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004120 |
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| Product | protein of unknown function DUF28 |
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| Protein accession | YP_003161330 |
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| Protein GI | 256832603 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.82714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0256064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGTC ACTCCAAATG GGCAACTACG AAACACAAAA AAGCGGCAAT CGACGCCAAG
CGCGGCAAAC TCTTCGCCCG CCTCATCAAA AACATTGAAG TTGCTGCCCG CACCGGGGGA
GGGGACCCCC AAGGAAACCC CACCCTGTTC GACGCAATCC AAACAGCCAA GAAAAACTCG
GTGCCTGGAG ACAACATCGA CCGTGCTGTC AAACGGGGAG CAGGGCTCAT CGAAGGTGGG
GCAGACTACC AAACCATCAT GTACGAGGGT TACGCACCAG GCGGAGTAGC AATACTCGTT
GAGTGCCTCA CCGACAACAA AAACCGTTCT GCCGCTGATG TGCGCGTCGC CTTCACCCGT
GGTGGTGGAC AACTCGCAGA CCCGGGCTCA GTGGCCTACA TGTTCTCCCG CAAAGGCCTC
GTCGTCATCC CCGCGAACAA CCACAACGAA GACGACATCA TGATGGCTGT TCTCGACGCC
GGCGCAGAAG AAGTCAACCA AGAAGGCGAC ACCTTCGAAG TGCTCTGTGA AGCAACAGAC
TTACGCGCAG TACGAGACGC ACTCGAATCC GCAGACATCG AATACGACTC CGCCGAATCA
ATCTGGCACC CCGCAACACG CATCGAACTC GACGCAGACG GCGCACGAAA AGTCTTCAAA
CTCATCGACG CACTCGAAGA CTCCGACGAC GTACAAAACG TCTACGCCAA CTACGACATC
ACCCCAGACG TCGCAGCTGA ACTCAACGAA GACGACTAA
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| Protein sequence | MAGHSKWATT KHKKAAIDAK RGKLFARLIK NIEVAARTGG GDPQGNPTLF DAIQTAKKNS
VPGDNIDRAV KRGAGLIEGG ADYQTIMYEG YAPGGVAILV ECLTDNKNRS AADVRVAFTR
GGGQLADPGS VAYMFSRKGL VVIPANNHNE DDIMMAVLDA GAEEVNQEGD TFEVLCEATD
LRAVRDALES ADIEYDSAES IWHPATRIEL DADGARKVFK LIDALEDSDD VQNVYANYDI
TPDVAAELNE DD
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