| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1363 |
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| Symbol | |
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| ID | 8380540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1459730 |
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| End bp | 1462144 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645004112 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_003161322 |
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| Protein GI | 256832595 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.401853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.596174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCTG AAATCAACAA CACGCAGGTG AGCCCTCACG AGAGTTCACA CACCGGTGAG
GAAGCTGCTC ACTCGGACGC TGTGTCAGAG GGCATCGTCG CATCAGCGAA GCCAGCCATT
GCCAAACCGA GCGATATTCG TTCAGTGGCA TCGGCTGCGG AACCTGAACG AGACGCAATG
GTGGTATCAA GTGCCGGCCG GGTGCGGTCA CGGTTTGGGC GCTTCGGTAC CCGGCACACC
ACGGGGACTC CCGCGCTCGA ACCACTCATT AGCGCGTTAC GCAATAATCA CCCGAAGGCA
GACGTTTCTA TCATTGAACG TGCCTACGCG ACTGCGGAAA AAGCGCACCG CGGGCAGATG
CGTAAAAGTG GTGACCCATA CATTACTCAC CCGGTTGCAG TTGCGACGAT TCTCGCCGAA
TTGGGCATGA CCGCATCAAC GTTGGCTGCT GCTTTACTTC ATGACACAGT GGAAGACACC
CCCTATTCGT TGGCGCAACT GACCAGTGAA TATGGGGAAG AAATCGCTTT GCTCGTTGAC
GGGGTCACCA AACTCGACAA AGTCCAGTAC GGTGACGCAG CCCAGTCTGA GACTGTGCGC
AAAATGGTTG TGGCGATGGC GAAGGACATT CGTGTCCTGA TGATCAAGCT GGCGGATCGC
CTCCACAATG CCCGCACATG GAAGTTTGTC CCCTCGCAGT CCGCGGCGAA GAAGGCGCGA
GAAACCTTAG AGATTTACGC TCCCCTTGCG CACCGTTTGG GAATGAACAC CATTAAGTGG
GAACTAGAGG ACCTGTCCTT CCAAACGTTG TACCCAAAGG TGTATGAAGA GATTGTCCAC
CTTGTTGCCG AGCGGGCTCC TGCTCGTGAG GAATACCTCA ATGTTGTGCG GGAGCACATC
AATCACGATT TGCGTGCAGC ACGCATTAAA GCAACGGTGA CGGGACGCCC CAAACACTAT
TATTCGATCT ACCAAAAAAT GATCGTCCGA GGGCATGACT TCCAAGACAT TTACGACCTG
GTCGGGACCC GAGTGTTGGT TGACACAGTC CGGGATTGTT ACGCCGCATT AGGTGCATTG
CACGCACGAT GGAACCCGGT TCCTGGGCGG TTCAAAGACT ACATCGCCAT GCCGAAGTTC
AACATGTACC AGTCACTCCA CACCACGGTG ATCGGTCCAG GCGGCAAACC TGTTGAGATT
CAGATCCGCA CCCATGACAT GCACCGTCGG GCAGAGTATG GTGTGGCGGC GCACTGGAAG
TATAAGGAAG GTGCTAAGGC TCCTGCTGGG GGTGGCTCTT CTGATATGGC GTGGTTGCGT
CAACTTGTTG ACTGGCAACG GGAAACCGCT GATCCCTCAG AGTTCCTTGA TTCGTTGCGT
TTCGAAATTG GTTCTCGTGA GGTGTATGTC TTTACACCCA AAGGTGACGT TGTTGCTCTA
CCGCAGGGTG CTACTCCGGT GGACTTCGCT TACTCTGTGC ACACAGAGGT GGGGCACCGA
ACAATGGGGG CAAGGGTCAA TGGTCGCCTT GTGCCCTTGG ACTCACAGCT TGAAACGGGC
GACACCGTTG ACATTTTGAC GTCAAAAGCA CAAACAGCTG GTCCGTCTCA GGACTGGATG
GCTTTTGTCA AGTCAGCTCG TGCACGGAAC AAGATTAGGC AATGGTTCCA AAAAGAACGC
CGTGATGAAG CGATCGAACA TGGTAAGGAC CAAATCGCCA AAGCATTACG GAAACAGAAT
TTGCCGTTCC AGCGGTTGCT ATCGCATGAG TCTGTTCTTG CCACGGCACA TGACATGCGC
TACCCCGATG TGTCTGCTCT CTATGCTGCA GTGGGTGAGG GGCAGATTTC TGCTGCGAAT
GTTGTGCAAA AACTTGTGGC AGCGTTGGGT GGTTCTCAAG CGAATGAGGA AGACCTTGCT
GAGGTCGCAC GTCCCTCAAA GGTGTCACGG TCACGCAGGC AGGGGGACCC TGGTGTTGTG
GTCAAAGGCA CCGACGATAT CTGGGTCAAA CTTGCAAAGT GCTGTACTCC TGTTCCCGGT
GACGACATCA TCGGTTTCGT CACCCGTGGG CAAGGGGTGT CCGTTCACCA GGTGGATTGT
CACAATGTGG AGCAGTTGCG TGAGCAGCCT GAGCGCATTG TTGATGTGGA GTGGACAACT
GGGTCCAACG CCATGTTCCT GGTGCAGATC CAAGTGGAAG CTCTCGATCG TCCCCGGCTC
CTGTCGGATG TCACCCGCGT ACTGTCAGAT TCACACGTGA ATATTTTGTC AGCGTCAGTG
ACCACCTCGA CCGACCGCGT AGCGATTTCG AAGTTCACCT TTGAAATGGC GGAACCAGCT
CACTTGACTA CAGTCTTGAA TGCTGTGCGA CGCATCGATG GTGTCTTTGA CGTCTATCGC
ATTAAAGGTG CGTAG
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| Protein sequence | MSAEINNTQV SPHESSHTGE EAAHSDAVSE GIVASAKPAI AKPSDIRSVA SAAEPERDAM
VVSSAGRVRS RFGRFGTRHT TGTPALEPLI SALRNNHPKA DVSIIERAYA TAEKAHRGQM
RKSGDPYITH PVAVATILAE LGMTASTLAA ALLHDTVEDT PYSLAQLTSE YGEEIALLVD
GVTKLDKVQY GDAAQSETVR KMVVAMAKDI RVLMIKLADR LHNARTWKFV PSQSAAKKAR
ETLEIYAPLA HRLGMNTIKW ELEDLSFQTL YPKVYEEIVH LVAERAPARE EYLNVVREHI
NHDLRAARIK ATVTGRPKHY YSIYQKMIVR GHDFQDIYDL VGTRVLVDTV RDCYAALGAL
HARWNPVPGR FKDYIAMPKF NMYQSLHTTV IGPGGKPVEI QIRTHDMHRR AEYGVAAHWK
YKEGAKAPAG GGSSDMAWLR QLVDWQRETA DPSEFLDSLR FEIGSREVYV FTPKGDVVAL
PQGATPVDFA YSVHTEVGHR TMGARVNGRL VPLDSQLETG DTVDILTSKA QTAGPSQDWM
AFVKSARARN KIRQWFQKER RDEAIEHGKD QIAKALRKQN LPFQRLLSHE SVLATAHDMR
YPDVSALYAA VGEGQISAAN VVQKLVAALG GSQANEEDLA EVARPSKVSR SRRQGDPGVV
VKGTDDIWVK LAKCCTPVPG DDIIGFVTRG QGVSVHQVDC HNVEQLREQP ERIVDVEWTT
GSNAMFLVQI QVEALDRPRL LSDVTRVLSD SHVNILSASV TTSTDRVAIS KFTFEMAEPA
HLTTVLNAVR RIDGVFDVYR IKGA
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