| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1347 |
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| Symbol | |
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| ID | 8380524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1441762 |
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| End bp | 1443432 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004096 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003161306 |
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| Protein GI | 256832579 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACAAC TGGGAGAAAT CCTCCTCGAA GAGGGTCTGG TCACCGAAGA CGAACTCCTT
CGTGCGCTGG ACGAACAGAT TGCGCGCGGT ACGAGCCTGG GGCGCGTGCT GGTGGAACTG
GGTGTGCTCA CAGAGAACCA ACTCGTGGCG GCCCTAGCCC AGCAAGTGGG GATGCGCTTC
GTAGACCTTG ACGATTATGC GGTCGACAGA GCCGCTGTTG TGAAAGTGCC CGGACCTGTG
TGCCAGCGCT ACAACGTCCT TCCTATTGCG ATTGACAACG GTCAACTCAT TTTGGCCATG
GCCGACCCAG GGAACGTGCT CGCAATTGAC GATGTTCGCC AAGTCGCGCA AATGCCTGTG
CAACCTGTCG TGTCGACACA CGAAAACCTC GCCAGGGCAC TCCAACGGTA CATCCGCGCT
GACGGCGAAA TGGATGACCT TGCTCACGCG CTTTCTGAAG AGCAAGAAGA AGAAATTGAC
CTTTCCGCAC TCGGTGACTC GGTCGAGGAC GACGCGCCCA TTGTTCGATA CGTGAACCTG
GTCGTCACCC AGGCGATCAC GGACCGCGCG TCAGACATCC ACATTGAGCC AACGGAACAC
GACCTTCGAG TGCGCTACCG CATCGATGGT GTGTTGCACG AGATGCAACG TTCTCCGAAG
TCCACGCAGA ATGCAGTGAC CTCCCGTGTG AAGATTCTCG CTGACATTGA TATTGCTGAG
CGCCGAAAGC CTCAGGATGG TCGCATGTCG GTCAACCATA AGGGGCGCAA AATTGACCTG
CGTGTGGCGA CGCTTCCCAC TGTGTGGGGC GAGAAAATCG TCATGCGTAT TCTCGATAAC
TCCACCGCCT CACTCGATTT GCGTGACCTT TCATTCGGCG AAGCGAACCT CGAGATTTAC
AAAGAGTCCT ATAACAAGCC GTACGGGATG ATCCTCGTGA CTGGGCCAAC GGGGTCGGGT
AAATCGACAA CACTGTACGC CACGCTCAAT GCAGTATCGA AGCCCGAAAT CAACGTGATC
ACGGTGGAAG ACCCTGTTGA ATACCGGCTT CCGGGCATTA ACCAAGTACA GGTGAACCCG
AAGTCCGGGC TGACCTTCGC TGCAGCGTTG CGTTCTATTT TGCGTTCGGA CCCGGATGTT
GTTCTTCTTG GTGAGATCCG TGACCACGAA ACCGCTCAAA TCGCTATCGA GGCAGCTCTC
ACCGGTCACC TCGTGTTATC CACTTTGCAC ACCAATGACG CACCGTCAGC TGTCACTCGT
CTCACTGAGA TGGGGATCGA ACCGTTCCTT GTGGGATCGG CACTGGACTG TGTGGTTGCT
CAACGGTTAG CACGGAAACT GTGTGACAAG TGCAAGGAAC CGTACCAACC ATCTGAGCGG
GAAATGATTG CCGCGAAGTT CCCGTGGGTT CCCGGCGAAG AAATTCCGAC ACTGTACCGG
CCAGGTGGTT GTGCAACATG TTCGCGGACC GGGTACCGCG GCAGGTTGGC TCTCCATGAG
GTCATGCAAG TCAACGAGGA TATTGAACGT CTTGCTGTTG CGCGGTCATC CGCCGCTGAA
ATTAGCTCGA CAGCCCAGAA AAACGGGATG TATACGCTGC GTGAAGACGG ATGGATGAAA
GTCGTTGAAG GAAAGACATC CATTGAAGAA GTGCTGCGTG TCGTGGCGTG A
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| Protein sequence | MKQLGEILLE EGLVTEDELL RALDEQIARG TSLGRVLVEL GVLTENQLVA ALAQQVGMRF
VDLDDYAVDR AAVVKVPGPV CQRYNVLPIA IDNGQLILAM ADPGNVLAID DVRQVAQMPV
QPVVSTHENL ARALQRYIRA DGEMDDLAHA LSEEQEEEID LSALGDSVED DAPIVRYVNL
VVTQAITDRA SDIHIEPTEH DLRVRYRIDG VLHEMQRSPK STQNAVTSRV KILADIDIAE
RRKPQDGRMS VNHKGRKIDL RVATLPTVWG EKIVMRILDN STASLDLRDL SFGEANLEIY
KESYNKPYGM ILVTGPTGSG KSTTLYATLN AVSKPEINVI TVEDPVEYRL PGINQVQVNP
KSGLTFAAAL RSILRSDPDV VLLGEIRDHE TAQIAIEAAL TGHLVLSTLH TNDAPSAVTR
LTEMGIEPFL VGSALDCVVA QRLARKLCDK CKEPYQPSER EMIAAKFPWV PGEEIPTLYR
PGGCATCSRT GYRGRLALHE VMQVNEDIER LAVARSSAAE ISSTAQKNGM YTLREDGWMK
VVEGKTSIEE VLRVVA
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