Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1339 |
Symbol | |
ID | 8380516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1431745 |
End bp | 1432806 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645004088 |
Product | type IV pilus assembly protein PilM |
Protein accession | YP_003161298 |
Protein GI | 256832571 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCGAA CATCGACAAT AGGCTTGGAC ATCGGGTCAA CCGCTGTCCG TGCCGCTCAA CTGGAATTTG GTTCTGGAGG GCCTGGATCA ACACCTCCAA CCTTGAGCGC GTACGCACAA CTGCCGTTAC CTGCAGGCGT CATGCAGGAC GGGGTTGTTG TGGAACCAGA CAAGGTTGCA TCTGCCGTCA AAGCTCTGTG GCAAGTGGGG AAGTTCTCCG CCCATGACGT GGTGATGGGT GTAGGAAACC AGCACGTCAT TGTGCGTGAA GCTGACTTGG CTTGGCAGCC CATGAACGTG TTGAAGAAAT CATTGCCGTA CCAAGCGCAG GACCTCCTTC CGGTTGCGTC AGGCGATGCG GTCTTCGATT TTGTTCCAAC CGGTGAGTTC GAGTCTGAAG AGGGCCGACG GATGTCTGGT CTTCTTGTTG CTGCTATTCG TGACATGGTG TCTGCTAACG TGCGGGCCGC GGAAGCCGGT GGGGTTCGCC CGCTCATGGT TGACCTCAAT CCGTTGGCGA TCCAACGTGC GCAAACTCAG GGTGAACTTA AAAAATACAC TGCAGCTTTT GTTGATGTGG GTGCTCGGAT CACCAATGTT GTCATTGCTG AACGTGGGCT ACCGCGGTTC GTGCGCGTGT TACCGCATGG AAGCCAGGAG TGTACTGACG CACTCGCGCA TACGATGTCG TCAACAGTTG AGGACGCAGA ACGTATGAAA CGCGAACTGG GCGTCGGGTA CCCAACAAAT CCAGAACGCC AACCACTCGC CGATGTGATC ATGAACGTGA CGTCCCAGCT GATCGAGTCC GTCCGTTCTA CCTTCGTGTA CTACGGAATG AAAAATCTGG GTGCTCCCAT TGACGTTGTG GTCCTCACCG GTGGTGGCGC TCTGCTGAAT GGTTTTGGTC AGTATCTTTC ATCAGCTGTT CGTCTCCCTG TCCAAATGGG AAATCCTTTT GACGGTGTCA CTGTCAAAAA GGGTGTCGAC CTTGGTCCTA TTCGTGGCAA CGAACAGGTG GCAACTGTTG CTCTTGGATT AGCATACGGG GACACAAAAT GA
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Protein sequence | MARTSTIGLD IGSTAVRAAQ LEFGSGGPGS TPPTLSAYAQ LPLPAGVMQD GVVVEPDKVA SAVKALWQVG KFSAHDVVMG VGNQHVIVRE ADLAWQPMNV LKKSLPYQAQ DLLPVASGDA VFDFVPTGEF ESEEGRRMSG LLVAAIRDMV SANVRAAEAG GVRPLMVDLN PLAIQRAQTQ GELKKYTAAF VDVGARITNV VIAERGLPRF VRVLPHGSQE CTDALAHTMS STVEDAERMK RELGVGYPTN PERQPLADVI MNVTSQLIES VRSTFVYYGM KNLGAPIDVV VLTGGGALLN GFGQYLSSAV RLPVQMGNPF DGVTVKKGVD LGPIRGNEQV ATVALGLAYG DTK
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