Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1335 |
Symbol | aroK |
ID | 8380512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1428327 |
End bp | 1428872 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645004084 |
Product | shikimate kinase |
Protein accession | YP_003161294 |
Protein GI | 256832567 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.89172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.76234 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATGG CCTCACACAC TGCGCCCCGT GTTGTCCTGA CCGGCCCACC CGGAGCTGGT AAATCAACGA TCGCGCGTCT CCTTGGCGAG GCGCTGGAAC TTCCTGTCCG TGACACGGAC ACTGATGTGG AAAGTGTCGC AGGGAAAAGC ATCACCGACA TTTTTGTTGA TGACGGTGAA CAGCATTTCC GGGAACTTGA GGCGCAGGCG GTTGCTACCG CGCTCCGTGA ACACACTGGT GTCTTGGCCC TTGGGGGTGG GGCAATCATG GACCCACAAA CACAAGAACT CCTCATGGAG TACACGGTCT CAGGAGGAAC AGTGGTGTTC CTTGATGTGT CCTTGGCGGC TGCTGCACCT CGCATCGGTT TCAACCAGGC ACGTCCACTC CTGCTGGGTA ACCCGCGAGC GCAGTGGAAG AAGTTGATGG ATACGCGTAG GCCGTTGTAT GAGCGGGTGG CGAATGCGCA TGTGGTGACT GATCATCGTA CGCCTGGTGA GGTTGCTGGT GACATTGTTT CTTTGGTGAA AGCGAGTGGG TTGTGA
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Protein sequence | MQMASHTAPR VVLTGPPGAG KSTIARLLGE ALELPVRDTD TDVESVAGKS ITDIFVDDGE QHFRELEAQA VATALREHTG VLALGGGAIM DPQTQELLME YTVSGGTVVF LDVSLAAAAP RIGFNQARPL LLGNPRAQWK KLMDTRRPLY ERVANAHVVT DHRTPGEVAG DIVSLVKASG L
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