Gene Jden_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1335 
SymbolaroK 
ID8380512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1428327 
End bp1428872 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content57% 
IMG OID645004084 
Productshikimate kinase 
Protein accessionYP_003161294 
Protein GI256832567 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.89172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.76234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATGG CCTCACACAC TGCGCCCCGT GTTGTCCTGA CCGGCCCACC CGGAGCTGGT 
AAATCAACGA TCGCGCGTCT CCTTGGCGAG GCGCTGGAAC TTCCTGTCCG TGACACGGAC
ACTGATGTGG AAAGTGTCGC AGGGAAAAGC ATCACCGACA TTTTTGTTGA TGACGGTGAA
CAGCATTTCC GGGAACTTGA GGCGCAGGCG GTTGCTACCG CGCTCCGTGA ACACACTGGT
GTCTTGGCCC TTGGGGGTGG GGCAATCATG GACCCACAAA CACAAGAACT CCTCATGGAG
TACACGGTCT CAGGAGGAAC AGTGGTGTTC CTTGATGTGT CCTTGGCGGC TGCTGCACCT
CGCATCGGTT TCAACCAGGC ACGTCCACTC CTGCTGGGTA ACCCGCGAGC GCAGTGGAAG
AAGTTGATGG ATACGCGTAG GCCGTTGTAT GAGCGGGTGG CGAATGCGCA TGTGGTGACT
GATCATCGTA CGCCTGGTGA GGTTGCTGGT GACATTGTTT CTTTGGTGAA AGCGAGTGGG
TTGTGA
 
Protein sequence
MQMASHTAPR VVLTGPPGAG KSTIARLLGE ALELPVRDTD TDVESVAGKS ITDIFVDDGE 
QHFRELEAQA VATALREHTG VLALGGGAIM DPQTQELLME YTVSGGTVVF LDVSLAAAAP
RIGFNQARPL LLGNPRAQWK KLMDTRRPLY ERVANAHVVT DHRTPGEVAG DIVSLVKASG
L