| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1334 |
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| Symbol | |
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| ID | 8380511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1427188 |
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| End bp | 1428330 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645004083 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_003161293 |
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| Protein GI | 256832566 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.904489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCTT CGGTGTCGGG GCGGGTTGAG CGGATTACGG TGTCTGCTGA GCGGAGGTAT
GACGTGGTTG TTGGGCGTCA TTTGTTGGGG GAGCTTCCTG GGTTGTTGGG GAGTTCGGTG
CGGAAGGTGT TGTTGGTTCA TCCGGGGGCG TTGGAGGCGT CTGCGGAGGC TGTGCGTGAG
GATTTGGTTG CGCAGGGCTA TGAGGTGTTG CTTGCTGTGA TTCCGGAGGC TGAAGAGGCG
AAGAGTATTC AGGTTGTTGC GTTTGCGTGG CAGATTTTGG GGCAGTCTGA TTTTACGCGT
TCGGATGCGA TTGTGTCGCT TGGTGGGGGT GCGACGACGG ATGTTGCTGG GTTTATTGCG
GCGACGTGGT TGCGGGGGAT TCAGGTTGTG CATATTCCGA CGACGTTGTT GGCGATGGTG
GATGCGGCTG TGGGTGGTAA GACGGGGGTG AATACTGCTG AGGGGAAGAA CTTGGTGGGT
GCTTTTCATT CTCCGTCTGG TGTGTTGTGT GATCTTGCTG CGTTGGAGAC GCTTCCGAAG
TGGGATTTTC TTGCTGGGCT TGCTGAGGTT GTGAAGACGG GTTTTATTGC GGATCCGGTG
ATTCTTGATC TTGTTGAGGA GCATGCGGGG GAGCTTGTTG AGTGGCCGGG GTCTGCGGGG
AGTGCGGGCT CAGTTGTTCA GGAGTTGGTG GAGCGGTCTG TTGCGGTGAA GGCTCGTGTG
GTGTCGCAGG ATCTGAAGGA AGCGTCCTTG CGGGAGATTC TTAATTACGG GCATACGTTT
GGGCATGCTA TTGAGCATGT GGAGCGGTAT CAGTGGCGGC ATGGGGCTGC TGTGTCTGTG
GGGATGGTGT TTGCTGCTGA GTTGGCGCGG TTGGCGGGGC GTTTGGATGA TGCAGTGGTG
GATCGGATGC GATCTATTTT GGTGTCGCTT GGGTTGCCGG TGAGTTATCG CGGTGATCGG
TGGGATCAGC TTTTGGCGGC GATGCGTCGT GATAAGAAGT CTCGTGGCGA TCTGTTGCGT
TTTGTAGTTC TTGAGGATGT GGGACGTCCG ACTCGGTTGG AGGGGCCTGA TCCGTTGTTG
TTGAGTGCTG CGTATGCTGA GGTGAGTGCT GAGGCTCGTC CGTCGCGCGC GGTTGTGTTG
TAG
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| Protein sequence | MSSSVSGRVE RITVSAERRY DVVVGRHLLG ELPGLLGSSV RKVLLVHPGA LEASAEAVRE
DLVAQGYEVL LAVIPEAEEA KSIQVVAFAW QILGQSDFTR SDAIVSLGGG ATTDVAGFIA
ATWLRGIQVV HIPTTLLAMV DAAVGGKTGV NTAEGKNLVG AFHSPSGVLC DLAALETLPK
WDFLAGLAEV VKTGFIADPV ILDLVEEHAG ELVEWPGSAG SAGSVVQELV ERSVAVKARV
VSQDLKEASL REILNYGHTF GHAIEHVERY QWRHGAAVSV GMVFAAELAR LAGRLDDAVV
DRMRSILVSL GLPVSYRGDR WDQLLAAMRR DKKSRGDLLR FVVLEDVGRP TRLEGPDPLL
LSAAYAEVSA EARPSRAVVL
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