Gene Jden_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1329 
Symbol 
ID8380506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1423967 
End bp1424530 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content54% 
IMG OID645004078 
Producttranslation elongation factor P 
Protein accessionYP_003161288 
Protein GI256832561 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.708183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.80129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTACCA CCAATGACAT CAAAAACGGC AGTGTCCTGC GACTTGACGG CCAACTGTGG 
GCTGTCCTGG AGTTTCAACA CGTGAAACCA GGAAAAGGCG GTGCCTTCGT GCGCACCAAA
ATCCGCAACA TCACGTCAGG CAAACTCGTC GACAAAACCT TCAACGCCGG TATGAAAATC
GAAATGGCGA TCGTCGACAA GTCCGACATG CAGTACCTTT ACCAAGACGG TGAGGACTAC
GTGTTCATGG ACCTCACCAC CTACGACCAA ATCACCATCC CCGCCGCGAC CGTGGGTGAC
GCAAAGAACT TCCTGTTGGA AAACGGCACC GCAACTGTTG CCACCAATGA CGGAACCGTA
CTTTACATTG AGCTCCCTGC CTCCATCACC ACCGTCATTA CCTACACCGA ACCTGGCCTC
CAAGGCGACC GCTCCTCTGC AGGAACAAAA TCAGCAACAA TCGAAACTGG CTACGAAATC
CAAGTGCCCC TGTTCCTCGA ACAAGGCACC AAAGTCAAGG TTGACACCCG CGATGGGTCC
TACCTTGGGC GAGTGAACGA CTGA
 
Protein sequence
MATTNDIKNG SVLRLDGQLW AVLEFQHVKP GKGGAFVRTK IRNITSGKLV DKTFNAGMKI 
EMAIVDKSDM QYLYQDGEDY VFMDLTTYDQ ITIPAATVGD AKNFLLENGT ATVATNDGTV
LYIELPASIT TVITYTEPGL QGDRSSAGTK SATIETGYEI QVPLFLEQGT KVKVDTRDGS
YLGRVND