Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1329 |
Symbol | |
ID | 8380506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1423967 |
End bp | 1424530 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645004078 |
Product | translation elongation factor P |
Protein accession | YP_003161288 |
Protein GI | 256832561 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
TIGRFAM ID | [TIGR00038] translation elongation factor P |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.708183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.80129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTACCA CCAATGACAT CAAAAACGGC AGTGTCCTGC GACTTGACGG CCAACTGTGG GCTGTCCTGG AGTTTCAACA CGTGAAACCA GGAAAAGGCG GTGCCTTCGT GCGCACCAAA ATCCGCAACA TCACGTCAGG CAAACTCGTC GACAAAACCT TCAACGCCGG TATGAAAATC GAAATGGCGA TCGTCGACAA GTCCGACATG CAGTACCTTT ACCAAGACGG TGAGGACTAC GTGTTCATGG ACCTCACCAC CTACGACCAA ATCACCATCC CCGCCGCGAC CGTGGGTGAC GCAAAGAACT TCCTGTTGGA AAACGGCACC GCAACTGTTG CCACCAATGA CGGAACCGTA CTTTACATTG AGCTCCCTGC CTCCATCACC ACCGTCATTA CCTACACCGA ACCTGGCCTC CAAGGCGACC GCTCCTCTGC AGGAACAAAA TCAGCAACAA TCGAAACTGG CTACGAAATC CAAGTGCCCC TGTTCCTCGA ACAAGGCACC AAAGTCAAGG TTGACACCCG CGATGGGTCC TACCTTGGGC GAGTGAACGA CTGA
|
Protein sequence | MATTNDIKNG SVLRLDGQLW AVLEFQHVKP GKGGAFVRTK IRNITSGKLV DKTFNAGMKI EMAIVDKSDM QYLYQDGEDY VFMDLTTYDQ ITIPAATVGD AKNFLLENGT ATVATNDGTV LYIELPASIT TVITYTEPGL QGDRSSAGTK SATIETGYEI QVPLFLEQGT KVKVDTRDGS YLGRVND
|
| |