Gene Jden_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1328 
Symbol 
ID8380505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1423549 
End bp1423965 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content59% 
IMG OID645004077 
ProductNusB antitermination factor 
Protein accessionYP_003161287 
Protein GI256832560 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.732904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.808756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCTC GCAGTAAAGC ACGCAAACGC GCAGTCAACA TTCTCTACGA AGCTGACCAA 
CGCAATCTGA GCGCCGCGCA AGTCCTCGAC ATTCGACTTG CTGACCCAGG AGTCCCCAGC
GCCCTACCCC AGTACGCCGT GGACCTCGTC GAAGGTGTCA TCCTGCACCG CGAGCGCATC
GATGAAATCC TCGAAACGTA CTCCCGCGGG TGGCCGCTAC GTCGAATGCC AGCCGTTGAC
CGCGCCATCT TGCGGTTAGG CACCTGGGAA CTGCTCTACA ACGACGACGT CCCAGACATT
GTTGCCATCG ACGAAGCTGT GGACCTCGCA CGCGAACTAT CCACTGAAGA TTCGCCCTCA
TTCGTCAATG GACTACTCGG GCGCGTCATG GACATCAAAC CAGCGCTCTC CGAATAG
 
Protein sequence
MAARSKARKR AVNILYEADQ RNLSAAQVLD IRLADPGVPS ALPQYAVDLV EGVILHRERI 
DEILETYSRG WPLRRMPAVD RAILRLGTWE LLYNDDVPDI VAIDEAVDLA RELSTEDSPS
FVNGLLGRVM DIKPALSE